Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC022616.4-201ENST00000522985 181 ntBASIC2.42□□□□□ -2.02
CDH12P55289 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
CDH12P55289 DEFB131C-201ENST00000528817 165 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AL670379.2-201ENST00000604983 252 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AL162730.1-201ENST00000605734 292 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AC069294.1-201ENST00000608397 350 ntBASIC2.42□□□□□ -2.02
CDH12P55289 AC090517.3-201ENST00000625170 141 ntBASIC2.42□□□□□ -2.02
CDH12P55289 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH12P55289 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH12P55289 Y_RNA.27-201ENST00000362540 103 ntBASIC2.41□□□□□ -2.02
CDH12P55289 U3.9-201ENST00000363823 204 ntBASIC2.41□□□□□ -2.02
CDH12P55289 SET-203ENST00000372688 801 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH12P55289 RNY3P4-201ENST00000384428 101 ntBASIC2.41□□□□□ -2.02
CDH12P55289 FO393413.1-201ENST00000402892 195 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AL139095.1-201ENST00000404326 391 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH12P55289 AL513477.1-202ENST00000417061 214 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AL358176.2-201ENST00000425769 204 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH12P55289 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH12P55289 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.41□□□□□ -2.02
CDH12P55289 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH12P55289 RNU6-1198P-201ENST00000516904 67 ntBASIC2.41□□□□□ -2.02
CDH12P55289 RNA5SP54-201ENST00000516951 92 ntBASIC2.41□□□□□ -2.02
CDH12P55289 Y_RNA.715-201ENST00000517082 110 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.41□□□□□ -2.02
CDH12P55289 AC090616.3-201ENST00000582184 217 ntBASIC2.41□□□□□ -2.02
CDH12P55289 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.41□□□□□ -2.02
CDH12P55289 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.41□□□□□ -2.02
CDH12P55289 AC005296.1-201ENST00000616145 209 ntBASIC2.41□□□□□ -2.02
CDH12P55289 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.41□□□□□ -2.02
CDH12P55289 U6.92-201ENST00000636464 89 ntBASIC2.41□□□□□ -2.02
CDH12P55289 BX322639.1-202ENST00000423987 2213 ntBASIC2.41□□□□□ -2.02
CDH12P55289 RNU6-944P-201ENST00000364023 107 ntBASIC2.4□□□□□ -2.03
CDH12P55289 RNU6-879P-201ENST00000364328 108 ntBASIC2.4□□□□□ -2.03
CDH12P55289 SNORD32B-201ENST00000364460 84 ntBASIC2.4□□□□□ -2.03
CDH12P55289 RNU6-26P-201ENST00000383985 107 ntBASIC2.4□□□□□ -2.03
CDH12P55289 RNU6-1105P-201ENST00000384774 107 ntBASIC2.4□□□□□ -2.03
CDH12P55289 RNU6-220P-201ENST00000390919 107 ntBASIC2.4□□□□□ -2.03
CDH12P55289 MIR548F4-201ENST00000408515 105 ntBASIC2.4□□□□□ -2.03
CDH12P55289 MIR1252-201ENST00000408861 65 ntBASIC2.4□□□□□ -2.03
CDH12P55289 RNU6-1001P-201ENST00000411265 100 ntBASIC2.4□□□□□ -2.03
CDH12P55289 HMGN2P35-201ENST00000412164 270 ntBASIC2.4□□□□□ -2.03
CDH12P55289 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH12P55289 AC080013.2-201ENST00000460866 323 ntBASIC2.4□□□□□ -2.03
CDH12P55289 AC010655.3-201ENST00000478818 450 ntBASIC2.4□□□□□ -2.03
CDH12P55289 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.4□□□□□ -2.03
CDH12P55289 RNA5SP367-201ENST00000516557 118 ntBASIC2.4□□□□□ -2.03
CDH12P55289 SNORA70.24-201ENST00000517233 118 ntBASIC2.4□□□□□ -2.03
CDH12P55289 AC091144.1-201ENST00000519573 138 ntBASIC2.4□□□□□ -2.03
CDH12P55289 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH12P55289 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
CDH12P55289 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH12P55289 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH12P55289 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.4□□□□□ -2.03
CDH12P55289 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
CDH12P55289 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.4□□□□□ -2.03
CDH12P55289 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CDH12P55289 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
CDH12P55289 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
CDH12P55289 Y_RNA.133-201ENST00000363428 110 ntBASIC2.39□□□□□ -2.03
CDH12P55289 MIR329-1-201ENST00000385028 80 ntBASIC2.39□□□□□ -2.03
CDH12P55289 MIR29B2-201ENST00000385055 81 ntBASIC2.39□□□□□ -2.03
CDH12P55289 Y_RNA.597-201ENST00000410463 100 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AC004866.1-201ENST00000411748 78 ntBASIC2.39□□□□□ -2.03
CDH12P55289 HSPE1P18-201ENST00000517602 280 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH12P55289 AL117187.1-201ENST00000555482 181 ntBASIC2.39□□□□□ -2.03
CDH12P55289 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH12P55289 RPS29P30-201ENST00000600975 111 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AL390123.1-201ENST00000603216 237 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AL021879.1-201ENST00000611756 288 ntBASIC2.39□□□□□ -2.03
CDH12P55289 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH12P55289 AL137790.1-201ENST00000634283 177 ntBASIC2.39□□□□□ -2.03
CDH12P55289 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH12P55289 AC080100.1-201ENST00000624239 5356 ntBASIC2.39□□□□□ -2.03
CDH12P55289 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CDH12P55289 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH12P55289 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
CDH12P55289 RNU6-1309P-201ENST00000363305 108 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RNU4-50P-201ENST00000364361 141 ntBASIC2.38□□□□□ -2.03
CDH12P55289 Y_RNA.380-201ENST00000365663 111 ntBASIC2.38□□□□□ -2.03
CDH12P55289 SNORA18.2-201ENST00000383865 132 ntBASIC2.38□□□□□ -2.03
CDH12P55289 Y_RNA.526-201ENST00000384572 110 ntBASIC2.38□□□□□ -2.03
CDH12P55289 Y_RNA.551-201ENST00000384661 102 ntBASIC2.38□□□□□ -2.03
CDH12P55289 MIR128-1-201ENST00000384921 82 ntBASIC2.38□□□□□ -2.03
CDH12P55289 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
CDH12P55289 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDH12P55289 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RNU6-130P-201ENST00000411112 103 ntBASIC2.38□□□□□ -2.03
CDH12P55289 DPH3P2-201ENST00000422618 250 ntBASIC2.38□□□□□ -2.03
CDH12P55289 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RPEP5-201ENST00000441137 268 ntBASIC2.38□□□□□ -2.03
CDH12P55289 SNORA25.14-201ENST00000516481 132 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RNU6-1012P-201ENST00000516606 109 ntBASIC2.38□□□□□ -2.03
CDH12P55289 RNU6-586P-201ENST00000517265 104 ntBASIC2.38□□□□□ -2.03
CDH12P55289 AC034114.1-201ENST00000520293 285 ntBASIC2.38□□□□□ -2.03
CDH12P55289 AC131281.1-201ENST00000522984 164 ntBASIC2.38□□□□□ -2.03
CDH12P55289 AC090517.1-201ENST00000569307 266 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms