Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 CTHRC1P1-201ENST00000605383 469 ntBASIC1.22□□□□□ -2.21
CDH6P55285 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL355802.3-201ENST00000607571 545 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC063944.3-201ENST00000609969 533 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AL354950.2-201ENST00000617939 290 ntBASIC1.22□□□□□ -2.21
CDH6P55285 AC095038.3-201ENST00000634439 195 ntBASIC1.22□□□□□ -2.21
CDH6P55285 MTND5P35-201ENST00000557537 1720 ntBASIC1.22□□□□□ -2.21
CDH6P55285 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
CDH6P55285 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CDH6P55285 RNU6-545P-201ENST00000362681 104 ntBASIC1.21□□□□□ -2.22
CDH6P55285 MRPL35P1-201ENST00000404272 572 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AL117342.1-201ENST00000404861 406 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC092447.3-201ENST00000426027 686 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH6P55285 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.21□□□□□ -2.22
CDH6P55285 BET1P1-201ENST00000482276 359 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
CDH6P55285 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
CDH6P55285 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.21□□□□□ -2.22
CDH6P55285 RNU2-34P-201ENST00000516534 121 ntBASIC1.21□□□□□ -2.22
CDH6P55285 RNU6-612P-201ENST00000516909 102 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC019176.1-201ENST00000518519 225 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC016256.1-201ENST00000547971 354 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC015688.6-201ENST00000577737 104 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC073648.5-201ENST00000603502 305 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AL353149.1-201ENST00000610667 244 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AL158063.1-201ENST00000615349 536 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AC008147.4-201ENST00000617570 1204 ntBASIC1.21□□□□□ -2.22
CDH6P55285 AL359697.1-201ENST00000624879 587 ntBASIC1.21□□□□□ -2.22
CDH6P55285 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
CDH6P55285 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDH6P55285 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDH6P55285 RNU5A-6P-201ENST00000384136 116 ntBASIC1.2□□□□□ -2.22
CDH6P55285 FGF7P8-201ENST00000402994 292 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH6P55285 AC090960.1-201ENST00000421072 306 ntBASIC1.2□□□□□ -2.22
CDH6P55285 EIF1P1-201ENST00000421436 341 ntBASIC1.2□□□□□ -2.22
CDH6P55285 CST2P1-201ENST00000425770 87 ntBASIC1.2□□□□□ -2.22
CDH6P55285 MTND3P9-201ENST00000429526 346 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AL163540.1-201ENST00000485382 386 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC093852.1-201ENST00000503587 266 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.2□□□□□ -2.22
CDH6P55285 RAB11AP2-201ENST00000545905 639 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AP003465.2-201ENST00000602571 373 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC121247.2-201ENST00000604776 136 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC087752.4-201ENST00000605911 462 ntBASIC1.2□□□□□ -2.22
CDH6P55285 AC005609.4-201ENST00000625071 447 ntBASIC1.2□□□□□ -2.22
CDH6P55285 RNU6-1065P-201ENST00000384513 106 ntBASIC1.19□□□□□ -2.22
CDH6P55285 RNU6-1158P-201ENST00000391167 107 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AL049545.1-201ENST00000401856 572 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AL353193.1-201ENST00000421444 268 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
CDH6P55285 MTCO2P19-201ENST00000427513 598 ntBASIC1.19□□□□□ -2.22
CDH6P55285 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.19□□□□□ -2.22
CDH6P55285 RNU6-956P-201ENST00000458868 103 ntBASIC1.19□□□□□ -2.22
CDH6P55285 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
CDH6P55285 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AC011406.1-201ENST00000512440 370 ntBASIC1.19□□□□□ -2.22
CDH6P55285 SNORA14.1-201ENST00000516113 141 ntBASIC1.19□□□□□ -2.22
CDH6P55285 RNU6-1038P-201ENST00000516516 104 ntBASIC1.19□□□□□ -2.22
CDH6P55285 RNU6-323P-201ENST00000521915 107 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AC104576.1-201ENST00000524225 88 ntBASIC1.19□□□□□ -2.22
CDH6P55285 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.19□□□□□ -2.22
CDH6P55285 MIR4753-201ENST00000585119 83 ntBASIC1.19□□□□□ -2.22
CDH6P55285 AL050343.2-201ENST00000607338 280 ntBASIC1.19□□□□□ -2.22
CDH6P55285 MIR6078-201ENST00000611069 100 ntBASIC1.19□□□□□ -2.22
CDH6P55285 RNU6-418P-201ENST00000384035 107 ntBASIC1.18□□□□□ -2.22
CDH6P55285 SNORA75-201ENST00000384158 137 ntBASIC1.18□□□□□ -2.22
CDH6P55285 SNORD37.1-201ENST00000390968 65 ntBASIC1.18□□□□□ -2.22
CDH6P55285 MIR1283-1-201ENST00000408494 87 ntBASIC1.18□□□□□ -2.22
CDH6P55285 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
CDH6P55285 Y_RNA.595-201ENST00000410403 105 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
CDH6P55285 Z82205.1-201ENST00000428456 297 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.18□□□□□ -2.22
CDH6P55285 AL603825.1-201ENST00000438481 80 ntBASIC1.18□□□□□ -2.22
CDH6P55285 MTCO2P18-201ENST00000457151 658 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH6P55285 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.18□□□□□ -2.22
CDH6P55285 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CDH6P55285 RNA5SP384-201ENST00000516615 116 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AC025423.5-201ENST00000550230 219 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH6P55285 AC007684.1-201ENST00000609671 477 ntBASIC1.18□□□□□ -2.22
CDH6P55285 AC126177.8-201ENST00000618339 1015 ntBASIC1.18□□□□□ -2.22
CDH6P55285 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.18□□□□□ -2.22
CDH6P55285 BX322639.1-202ENST00000423987 2213 ntBASIC1.17□□□□□ -2.22
CDH6P55285 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
CDH6P55285 RNU6-227P-201ENST00000362865 103 ntBASIC1.17□□□□□ -2.22
CDH6P55285 SNORA72.2-201ENST00000365028 127 ntBASIC1.17□□□□□ -2.22
CDH6P55285 MIR194-1-201ENST00000384892 85 ntBASIC1.17□□□□□ -2.22
CDH6P55285 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH6P55285 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.17□□□□□ -2.22
CDH6P55285 AL606489.2-201ENST00000433886 234 ntBASIC1.17□□□□□ -2.22
CDH6P55285 AC092473.1-201ENST00000441098 221 ntBASIC1.17□□□□□ -2.22
CDH6P55285 TPTE2P5-203ENST00000458118 728 ntBASIC1.17□□□□□ -2.22
CDH6P55285 RNU6-1037P-201ENST00000459571 107 ntBASIC1.17□□□□□ -2.22
CDH6P55285 RPS29P27-201ENST00000463711 170 ntBASIC1.17□□□□□ -2.22
CDH6P55285 AC025465.4-201ENST00000513422 638 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms