Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 Y_RNA.530-201ENST00000384587 101 ntBASIC1.84□□□□□ -2.11
VCPP55072 MIR29C-201ENST00000385231 88 ntBASIC1.84□□□□□ -2.11
VCPP55072 SNORD115-47-201ENST00000391226 86 ntBASIC1.84□□□□□ -2.11
VCPP55072 MIR1283-2-201ENST00000408621 87 ntBASIC1.84□□□□□ -2.11
VCPP55072 MIR548F1-201ENST00000408667 84 ntBASIC1.84□□□□□ -2.11
VCPP55072 RNU6-373P-201ENST00000411247 98 ntBASIC1.84□□□□□ -2.11
VCPP55072 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.84□□□□□ -2.11
VCPP55072 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.84□□□□□ -2.11
VCPP55072 HSPE1P21-201ENST00000438283 308 ntBASIC1.84□□□□□ -2.11
VCPP55072 MTND4LP16-201ENST00000440828 295 ntBASIC1.84□□□□□ -2.11
VCPP55072 U8.21-201ENST00000459536 136 ntBASIC1.84□□□□□ -2.11
VCPP55072 RPS29P27-201ENST00000463711 170 ntBASIC1.84□□□□□ -2.11
VCPP55072 RNA5SP102-201ENST00000516865 106 ntBASIC1.84□□□□□ -2.11
VCPP55072 AC026371.1-201ENST00000551867 419 ntBASIC1.84□□□□□ -2.11
VCPP55072 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.84□□□□□ -2.11
VCPP55072 MIR3923-201ENST00000579521 83 ntBASIC1.84□□□□□ -2.11
VCPP55072 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.84□□□□□ -2.11
VCPP55072 AC068790.6-201ENST00000602558 258 ntBASIC1.84□□□□□ -2.11
VCPP55072 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.84□□□□□ -2.11
VCPP55072 AC090517.2-201ENST00000614966 680 ntBASIC1.84□□□□□ -2.11
VCPP55072 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.84□□□□□ -2.11
VCPP55072 SNORA43.4-201ENST00000629559 138 ntBASIC1.84□□□□□ -2.11
VCPP55072 AC073869.6-201ENST00000640656 341 ntBASIC1.84□□□□□ -2.11
VCPP55072 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
VCPP55072 AC009541.1-201ENST00000438279 2662 ntBASIC1.84□□□□□ -2.12
VCPP55072 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VCPP55072 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VCPP55072 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.83□□□□□ -2.12
VCPP55072 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
VCPP55072 RNU6-1252P-201ENST00000363054 104 ntBASIC1.83□□□□□ -2.12
VCPP55072 SNORD32B-201ENST00000364460 84 ntBASIC1.83□□□□□ -2.12
VCPP55072 RNU6-534P-201ENST00000364877 106 ntBASIC1.83□□□□□ -2.12
VCPP55072 Y_RNA.295-201ENST00000364918 102 ntBASIC1.83□□□□□ -2.12
VCPP55072 RNU6-234P-201ENST00000365229 104 ntBASIC1.83□□□□□ -2.12
VCPP55072 RNU6-128P-201ENST00000383976 107 ntBASIC1.83□□□□□ -2.12
VCPP55072 SNORA12-201ENST00000391162 147 ntBASIC1.83□□□□□ -2.12
VCPP55072 MTCYBP2-201ENST00000407745 171 ntBASIC1.83□□□□□ -2.12
VCPP55072 MIR1262-201ENST00000408276 93 ntBASIC1.83□□□□□ -2.12
VCPP55072 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
VCPP55072 BX510359.4-201ENST00000423750 193 ntBASIC1.83□□□□□ -2.12
VCPP55072 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 MTND3P9-201ENST00000429526 346 ntBASIC1.83□□□□□ -2.12
VCPP55072 AL645568.3-201ENST00000433683 316 ntBASIC1.83□□□□□ -2.12
VCPP55072 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.83□□□□□ -2.12
VCPP55072 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 AC011604.1-201ENST00000545978 196 ntBASIC1.83□□□□□ -2.12
VCPP55072 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 HSBP1P1-201ENST00000555205 166 ntBASIC1.83□□□□□ -2.12
VCPP55072 AC021231.3-201ENST00000558497 370 ntBASIC1.83□□□□□ -2.12
VCPP55072 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.83□□□□□ -2.12
VCPP55072 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
VCPP55072 MIR3688-2-201ENST00000636963 87 ntBASIC1.83□□□□□ -2.12
VCPP55072 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPP55072 Y_RNA.100-201ENST00000363141 102 ntBASIC1.82□□□□□ -2.12
VCPP55072 SNORA36A-201ENST00000384221 132 ntBASIC1.82□□□□□ -2.12
VCPP55072 RNA5SP465-201ENST00000391195 109 ntBASIC1.82□□□□□ -2.12
VCPP55072 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VCPP55072 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
VCPP55072 RNU6-325P-201ENST00000411132 105 ntBASIC1.82□□□□□ -2.12
VCPP55072 VN1R36P-201ENST00000414936 291 ntBASIC1.82□□□□□ -2.12
VCPP55072 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPP55072 UBE2V1P8-201ENST00000437166 265 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC009474.2-201ENST00000451383 136 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.82□□□□□ -2.12
VCPP55072 PRELID3BP1-201ENST00000457142 540 ntBASIC1.82□□□□□ -2.12
VCPP55072 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
VCPP55072 RNU7-66P-201ENST00000459469 62 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC007547.1-201ENST00000462177 490 ntBASIC1.82□□□□□ -2.12
VCPP55072 HMGN1P7-201ENST00000491722 313 ntBASIC1.82□□□□□ -2.12
VCPP55072 TRBVA-201ENST00000498804 316 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC114801.2-201ENST00000503825 781 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.82□□□□□ -2.12
VCPP55072 FAM206BP-201ENST00000510179 541 ntBASIC1.82□□□□□ -2.12
VCPP55072 AP005660.1-201ENST00000522972 293 ntBASIC1.82□□□□□ -2.12
VCPP55072 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.82□□□□□ -2.12
VCPP55072 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.82□□□□□ -2.12
VCPP55072 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.82□□□□□ -2.12
VCPP55072 Z98751.3-201ENST00000604447 521 ntBASIC1.82□□□□□ -2.12
VCPP55072 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
VCPP55072 MIR1248-201ENST00000629190 106 ntBASIC1.82□□□□□ -2.12
VCPP55072 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VCPP55072 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.82□□□□□ -2.12
VCPP55072 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VCPP55072 RNU6-743P-201ENST00000364151 106 ntBASIC1.81□□□□□ -2.12
VCPP55072 SNORD114-22-201ENST00000365423 72 ntBASIC1.81□□□□□ -2.12
VCPP55072 RNU11-3P-201ENST00000391111 133 ntBASIC1.81□□□□□ -2.12
VCPP55072 RNA5SP201-201ENST00000410316 124 ntBASIC1.81□□□□□ -2.12
VCPP55072 ZNF885P-201ENST00000420174 1098 ntBASIC1.81□□□□□ -2.12
VCPP55072 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.81□□□□□ -2.12
VCPP55072 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.81□□□□□ -2.12
VCPP55072 AC245102.2-201ENST00000448956 180 ntBASIC1.81□□□□□ -2.12
VCPP55072 RNU1-123P-201ENST00000458950 160 ntBASIC1.81□□□□□ -2.12
VCPP55072 AC092989.1-201ENST00000481235 277 ntBASIC1.81□□□□□ -2.12
VCPP55072 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.81□□□□□ -2.12
VCPP55072 MTCO1P29-201ENST00000496868 288 ntBASIC1.81□□□□□ -2.12
VCPP55072 MTCYBP18-201ENST00000501056 747 ntBASIC1.81□□□□□ -2.12
VCPP55072 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.81□□□□□ -2.12
VCPP55072 AC011352.1-201ENST00000512300 793 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms