Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SNORA25B-201ENST00000365507 128 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 SNORA26.3-201ENST00000391119 136 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 RN7SKP61-201ENST00000410642 295 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCN4P51793 PCMTD1P1-201ENST00000455560 355 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 AC025033.1-201ENST00000463883 194 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.07□□□□□ -2.08
CLCN4P51793 AC114801.2-201ENST00000503825 781 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 AC022447.4-201ENST00000504053 364 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCN4P51793 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
CLCN4P51793 SNORA4.4-201ENST00000515921 135 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 SNORD98-201ENST00000636377 67 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 MIR1302-1-201ENST00000637932 143 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
CLCN4P51793 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLCN4P51793 RNU4-73P-201ENST00000363164 141 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 Y_RNA.238-201ENST00000364441 102 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RNU4-56P-201ENST00000364700 142 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 Y_RNA.387-201ENST00000383918 102 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RNU6-784P-201ENST00000384330 106 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RNU6-174P-201ENST00000410406 106 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RNU2-32P-201ENST00000411193 191 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AL590135.1-201ENST00000422215 156 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC019205.3-201ENST00000424573 156 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC016700.2-201ENST00000446011 156 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCN4P51793 AC015911.1-201ENST00000495111 156 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RPL23AP63-201ENST00000498752 471 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 HMGB1P35-201ENST00000503360 598 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.06□□□□□ -2.08
CLCN4P51793 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCN4P51793 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCN4P51793 AC093027.1-201ENST00000546698 429 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
CLCN4P51793 AL355375.2-201ENST00000574825 175 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.06□□□□□ -2.08
CLCN4P51793 MIR3136-201ENST00000583498 78 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC008749.1-201ENST00000597650 306 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AC018889.1-201ENST00000605372 397 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 MIR6128-201ENST00000615528 109 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 SNORA43.4-201ENST00000629559 138 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 AP000560.1-201ENST00000624150 1937 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.06□□□□□ -2.08
CLCN4P51793 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLCN4P51793 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
CLCN4P51793 Y_RNA.61-201ENST00000362835 102 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RNU6-797P-201ENST00000363101 109 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RNU6-842P-201ENST00000384269 107 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 SNORD116-29-201ENST00000384516 83 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RNU6-601P-201ENST00000384540 107 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CLCN4P51793 BTF3L4P2-201ENST00000392798 346 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 Y_RNA.595-201ENST00000410403 105 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 Y_RNA.597-201ENST00000410463 100 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC078809.1-201ENST00000427601 140 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 USP9YP30-201ENST00000430729 455 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCN4P51793 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCN4P51793 RNU7-152P-201ENST00000458982 64 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RN7SKP210-201ENST00000459176 261 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC016632.1-201ENST00000503994 196 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.05□□□□□ -2.08
CLCN4P51793 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 RNU1-54P-201ENST00000517181 120 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 SNORA31.25-201ENST00000517242 134 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC016256.1-201ENST00000547971 354 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.05□□□□□ -2.08
CLCN4P51793 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC005034.5-201ENST00000604219 466 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AL034555.1-201ENST00000604816 211 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AP000654.2-201ENST00000605633 586 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC019193.3-201ENST00000609144 554 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC005296.1-201ENST00000616145 209 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AL450472.1-202ENST00000637286 180 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 AC009487.4-201ENST00000624969 3585 ntBASIC2.05□□□□□ -2.08
CLCN4P51793 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CLCN4P51793 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLCN4P51793 RNU4-79P-201ENST00000362764 141 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 SNORD50.1-201ENST00000362987 71 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 RNU6-1188P-201ENST00000363795 107 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 RNU6-944P-201ENST00000364023 107 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 Y_RNA.356-201ENST00000365475 113 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 RNU6-933P-201ENST00000384424 107 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 Y_RNA.504-201ENST00000384481 104 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 RNU6-306P-201ENST00000384617 107 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 SNORA17.3-201ENST00000391159 129 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.04□□□□□ -2.08
CLCN4P51793 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLCN4P51793 EIF4EP2-201ENST00000422816 654 ntBASIC2.04□□□□□ -2.08
CLCN4P51793 AC108667.1-201ENST00000428618 249 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms