Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.53□□□□□ -2.33
RPL28P46779 HSBP1P2-201ENST00000299671 229 ntBASIC0.52□□□□□ -2.33
RPL28P46779 RNU6-1029P-201ENST00000384109 107 ntBASIC0.52□□□□□ -2.33
RPL28P46779 RNU6-1127P-201ENST00000384580 107 ntBASIC0.52□□□□□ -2.33
RPL28P46779 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
RPL28P46779 SNORD70.1-201ENST00000391007 85 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC002429.1-201ENST00000437672 148 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AL603825.1-201ENST00000438481 80 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AL606517.2-201ENST00000442855 241 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC048334.1-201ENST00000477975 159 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.52□□□□□ -2.33
RPL28P46779 FABP5P5-201ENST00000515537 406 ntBASIC0.52□□□□□ -2.33
RPL28P46779 SNORD79.1-201ENST00000516069 84 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC016256.1-201ENST00000547971 354 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.52□□□□□ -2.33
RPL28P46779 AGGF1P4-201ENST00000568249 801 ntBASIC0.52□□□□□ -2.33
RPL28P46779 RSL24D1P11-201ENST00000591045 491 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AL513534.2-201ENST00000603836 250 ntBASIC0.52□□□□□ -2.33
RPL28P46779 FAM71BP1-201ENST00000604431 523 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL28P46779 AP000240.1-201ENST00000609910 452 ntBASIC0.52□□□□□ -2.33
RPL28P46779 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC106800.4-201ENST00000614905 153 ntBASIC0.52□□□□□ -2.33
RPL28P46779 AC005562.2-201ENST00000618264 111 ntBASIC0.52□□□□□ -2.33
RPL28P46779 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.52□□□□□ -2.33
RPL28P46779 Y_RNA.124-201ENST00000363339 93 ntBASIC0.51□□□□□ -2.33
RPL28P46779 RNU5F-7P-201ENST00000363696 115 ntBASIC0.51□□□□□ -2.33
RPL28P46779 RNU6-266P-201ENST00000364225 107 ntBASIC0.51□□□□□ -2.33
RPL28P46779 RNU6-108P-201ENST00000365558 107 ntBASIC0.51□□□□□ -2.33
RPL28P46779 RNU6-417P-201ENST00000384712 107 ntBASIC0.51□□□□□ -2.33
RPL28P46779 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AL606490.4-201ENST00000423117 127 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AC010154.1-201ENST00000425857 269 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL28P46779 AC245047.7-201ENST00000440265 293 ntBASIC0.51□□□□□ -2.33
RPL28P46779 UBE2D3P4-201ENST00000441973 436 ntBASIC0.51□□□□□ -2.33
RPL28P46779 ZNF114P1-201ENST00000453500 292 ntBASIC0.51□□□□□ -2.33
RPL28P46779 TRBVA-201ENST00000498804 316 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL28P46779 PDCD5P2-201ENST00000507570 312 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL28P46779 RNU6-311P-201ENST00000516224 102 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AC136628.3-201ENST00000521868 290 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AL590705.4-201ENST00000532209 134 ntBASIC0.51□□□□□ -2.33
RPL28P46779 CBX3P8-201ENST00000532412 525 ntBASIC0.51□□□□□ -2.33
RPL28P46779 ELOCP32-201ENST00000548625 324 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.51□□□□□ -2.33
RPL28P46779 AC026470.2-201ENST00000561492 181 ntBASIC0.51□□□□□ -2.33
RPL28P46779 MIR4703-201ENST00000577728 79 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL28P46779 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL28P46779 AC108706.1-201ENST00000611053 297 ntBASIC0.51□□□□□ -2.33
RPL28P46779 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.51□□□□□ -2.33
RPL28P46779 AC008163.1-202ENST00000636004 2889 ntBASIC0.51□□□□□ -2.33
RPL28P46779 U6.108-201ENST00000637764 58 ntBASIC0.51□□□□□ -2.33
RPL28P46779 RNU6-1097P-201ENST00000363586 107 ntBASIC0.5□□□□□ -2.33
RPL28P46779 Y_RNA.363-201ENST00000365529 113 ntBASIC0.5□□□□□ -2.33
RPL28P46779 RNU6-505P-201ENST00000384427 107 ntBASIC0.5□□□□□ -2.33
RPL28P46779 MIR549A-201ENST00000385268 96 ntBASIC0.5□□□□□ -2.33
RPL28P46779 RNA5SP467-201ENST00000391274 118 ntBASIC0.5□□□□□ -2.33
RPL28P46779 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.5□□□□□ -2.33
RPL28P46779 MTND5P15-201ENST00000434246 349 ntBASIC0.5□□□□□ -2.33
RPL28P46779 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
RPL28P46779 AC004386.2-201ENST00000441858 148 ntBASIC0.5□□□□□ -2.33
RPL28P46779 NFU1P2-201ENST00000448700 469 ntBASIC0.5□□□□□ -2.33
RPL28P46779 RPS29P15-201ENST00000458329 171 ntBASIC0.5□□□□□ -2.33
RPL28P46779 snoU13.6-201ENST00000458785 104 ntBASIC0.5□□□□□ -2.33
RPL28P46779 SRRM1P2-201ENST00000464531 1192 ntBASIC0.5□□□□□ -2.33
RPL28P46779 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.5□□□□□ -2.33
RPL28P46779 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.5□□□□□ -2.33
RPL28P46779 AP003461.1-201ENST00000528866 78 ntBASIC0.5□□□□□ -2.33
RPL28P46779 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
RPL28P46779 AL391840.1-201ENST00000571144 367 ntBASIC0.5□□□□□ -2.33
RPL28P46779 MIR3124-201ENST00000582636 67 ntBASIC0.5□□□□□ -2.33
RPL28P46779 AC022432.1-201ENST00000595739 310 ntBASIC0.5□□□□□ -2.33
RPL28P46779 AL022161.1-201ENST00000604390 213 ntBASIC0.5□□□□□ -2.33
RPL28P46779 TCL6_2.1-201ENST00000615162 119 ntBASIC0.5□□□□□ -2.33
RPL28P46779 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
RPL28P46779 SNORD114-27-201ENST00000363766 70 ntBASIC0.49□□□□□ -2.33
RPL28P46779 Y_RNA.399-201ENST00000383955 105 ntBASIC0.49□□□□□ -2.33
RPL28P46779 MIR1-2-201ENST00000384961 85 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RN7SKP200-201ENST00000410564 320 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AC004866.1-201ENST00000411748 78 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RPS3AP3-201ENST00000411933 242 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RPS26P42-201ENST00000413485 326 ntBASIC0.49□□□□□ -2.33
RPL28P46779 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.49□□□□□ -2.33
RPL28P46779 MTND3P17-201ENST00000416968 344 ntBASIC0.49□□□□□ -2.33
RPL28P46779 TIMM9P3-201ENST00000428659 274 ntBASIC0.49□□□□□ -2.33
RPL28P46779 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.49□□□□□ -2.33
RPL28P46779 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.49□□□□□ -2.33
RPL28P46779 AC009237.7-201ENST00000447357 229 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.49□□□□□ -2.33
RPL28P46779 GMFBP1-201ENST00000467831 427 ntBASIC0.49□□□□□ -2.33
RPL28P46779 MTND2P14-201ENST00000482139 351 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RNU6-1069P-201ENST00000516612 133 ntBASIC0.49□□□□□ -2.33
RPL28P46779 RNU6-922P-201ENST00000516753 99 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AC069113.1-201ENST00000517763 267 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AL121579.1-201ENST00000555129 305 ntBASIC0.49□□□□□ -2.33
RPL28P46779 AC109446.2-201ENST00000567872 497 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms