Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 RNU6-227P-201ENST00000362865 103 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 RNU6-348P-201ENST00000384386 107 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 MIR1283-1-201ENST00000408494 87 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AC069257.2-201ENST00000441819 155 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.16□□□□□ -2.22
SLC1A1P43005 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.16□□□□□ -2.22
SLC1A1P43005 snoU13.27-201ENST00000459278 104 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 RNU6-1037P-201ENST00000459571 107 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AL163540.1-201ENST00000485382 386 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AC016256.1-201ENST00000547971 354 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AC015688.6-201ENST00000577737 104 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 MIR4753-201ENST00000585119 83 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AC004223.2-201ENST00000590309 544 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AL353149.1-201ENST00000610667 244 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 AC005562.2-201ENST00000618264 111 ntBASIC1.16□□□□□ -2.22
SLC1A1P43005 BX322639.1-202ENST00000423987 2213 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 AL606923.1-201ENST00000406616 190 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 RPS6P15-201ENST00000431996 751 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.15□□□□□ -2.23
SLC1A1P43005 AC073910.1-201ENST00000445047 438 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.15□□□□□ -2.23
SLC1A1P43005 RPS29P27-201ENST00000463711 170 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 SNORA14.1-201ENST00000516113 141 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.15□□□□□ -2.23
SLC1A1P43005 AC145350.1-201ENST00000567426 208 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 MIR4528-201ENST00000577763 90 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 NIFKP6-201ENST00000598115 845 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 AC016727.2-201ENST00000603988 621 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 AL354950.2-201ENST00000617939 290 ntBASIC1.15□□□□□ -2.23
SLC1A1P43005 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SLC1A1P43005 RNU5A-6P-201ENST00000384136 116 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 SNORA29-201ENST00000384183 140 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 MTND3P9-201ENST00000429526 346 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 AC093852.1-201ENST00000503587 266 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 AC025465.4-201ENST00000513422 638 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 AC108729.3-201ENST00000513484 108 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 RNU2-34P-201ENST00000516534 121 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.14□□□□□ -2.23
SLC1A1P43005 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 MIR5006-201ENST00000583027 110 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 MIR338-201ENST00000636369 67 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 MTND5P35-201ENST00000557537 1720 ntBASIC1.14□□□□□ -2.23
SLC1A1P43005 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SLC1A1P43005 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC1A1P43005 Y_RNA.381-201ENST00000365666 102 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 MIR194-1-201ENST00000384892 85 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 Y_RNA.595-201ENST00000410403 105 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.13□□□□□ -2.23
SLC1A1P43005 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.13□□□□□ -2.23
SLC1A1P43005 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.13□□□□□ -2.23
SLC1A1P43005 AC073464.1-201ENST00000429823 534 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC1A1P43005 TOMM22P2-201ENST00000430735 237 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AC004386.2-201ENST00000441858 148 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 USP9YP29-201ENST00000445112 563 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AC016717.1-201ENST00000448918 286 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 RPL30P7-201ENST00000479312 323 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AC010493.1-201ENST00000513479 292 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 Y_RNA.717-201ENST00000517106 92 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC1A1P43005 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.13□□□□□ -2.23
SLC1A1P43005 MIR4424-201ENST00000585257 86 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AL391646.1-201ENST00000603860 190 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AC104458.1-201ENST00000608243 463 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 AC064836.2-201ENST00000609491 462 ntBASIC1.13□□□□□ -2.23
SLC1A1P43005 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC1A1P43005 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
SLC1A1P43005 AL391987.6-201ENST00000305671 199 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 RNU5B-2P-201ENST00000363036 113 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 SNORA4.2-201ENST00000365313 147 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 Y_RNA.338-201ENST00000365320 114 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 MIR513A1-201ENST00000385138 129 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 RNU6-1158P-201ENST00000391167 107 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 RNA5SP494-201ENST00000410653 129 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 AC004965.1-201ENST00000413033 213 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 COX6CP10-201ENST00000416832 224 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 EIF1P1-201ENST00000421436 341 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.12□□□□□ -2.23
SLC1A1P43005 USP9YP14-201ENST00000430663 563 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.12□□□□□ -2.23
SLC1A1P43005 MTCO2P18-201ENST00000457151 658 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 ARL2BPP4-201ENST00000506854 471 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 RNU6-189P-201ENST00000516120 101 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 AC104576.1-201ENST00000524225 88 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.12□□□□□ -2.23
SLC1A1P43005 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.12□□□□□ -2.23
SLC1A1P43005 AC026470.2-201ENST00000561492 181 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.12□□□□□ -2.23
SLC1A1P43005 AC073114.1-201ENST00000612027 490 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 TCL6_2.1-201ENST00000615162 119 ntBASIC1.12□□□□□ -2.23
SLC1A1P43005 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SLC1A1P43005 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
SLC1A1P43005 SNORA33-201ENST00000363664 130 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms