Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-1106P-201ENST00000390845 107 ntBASIC1.09□□□□□ -2.23
RFC3P40938 MIR1283-1-201ENST00000408494 87 ntBASIC1.09□□□□□ -2.23
RFC3P40938 MTATP6P18-201ENST00000417994 673 ntBASIC1.09□□□□□ -2.23
RFC3P40938 TOMM22P2-201ENST00000430735 237 ntBASIC1.09□□□□□ -2.23
RFC3P40938 CETN4P-201ENST00000432407 469 ntBASIC1.09□□□□□ -2.23
RFC3P40938 snoU13.27-201ENST00000459278 104 ntBASIC1.09□□□□□ -2.23
RFC3P40938 RNU7-138P-201ENST00000459479 64 ntBASIC1.09□□□□□ -2.23
RFC3P40938 AC011406.1-201ENST00000512440 370 ntBASIC1.09□□□□□ -2.23
RFC3P40938 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC3P40938 RNA5SP384-201ENST00000516615 116 ntBASIC1.09□□□□□ -2.23
RFC3P40938 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
RFC3P40938 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC3P40938 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.09□□□□□ -2.23
RFC3P40938 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.23
RFC3P40938 DEFB131C-201ENST00000528817 165 ntBASIC1.09□□□□□ -2.23
RFC3P40938 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.09□□□□□ -2.23
RFC3P40938 AC090115.3-201ENST00000553218 849 ntBASIC1.09□□□□□ -2.23
RFC3P40938 MIR3913-1-201ENST00000577744 102 ntBASIC1.09□□□□□ -2.23
RFC3P40938 MIR5583-1-201ENST00000580941 59 ntBASIC1.09□□□□□ -2.23
RFC3P40938 MTATP6P3-201ENST00000581686 676 ntBASIC1.09□□□□□ -2.23
RFC3P40938 AC109347.2-201ENST00000610220 349 ntBASIC1.09□□□□□ -2.23
RFC3P40938 AC126177.8-201ENST00000618339 1015 ntBASIC1.09□□□□□ -2.23
RFC3P40938 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.09□□□□□ -2.23
RFC3P40938 BX322639.1-202ENST00000423987 2213 ntBASIC1.08□□□□□ -2.24
RFC3P40938 MIR96-201ENST00000362288 78 ntBASIC1.08□□□□□ -2.24
RFC3P40938 RNU6-418P-201ENST00000384035 107 ntBASIC1.08□□□□□ -2.24
RFC3P40938 RNU6-1065P-201ENST00000384513 106 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AC090960.1-201ENST00000421072 306 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.08□□□□□ -2.24
RFC3P40938 RNU7-180P-201ENST00000459240 63 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AC091435.1-201ENST00000505442 584 ntBASIC1.08□□□□□ -2.24
RFC3P40938 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.08□□□□□ -2.24
RFC3P40938 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.08□□□□□ -2.24
RFC3P40938 NIFKP6-201ENST00000598115 845 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AC008536.2-201ENST00000607284 349 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AL359697.1-201ENST00000624879 587 ntBASIC1.08□□□□□ -2.24
RFC3P40938 AC005609.4-201ENST00000625071 447 ntBASIC1.08□□□□□ -2.24
RFC3P40938 MIR338-201ENST00000636369 67 ntBASIC1.08□□□□□ -2.24
RFC3P40938 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
RFC3P40938 OR4G1P-203ENST00000641984 1631 ntBASIC1.07□□□□□ -2.24
RFC3P40938 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
RFC3P40938 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
RFC3P40938 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.07□□□□□ -2.24
RFC3P40938 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.07□□□□□ -2.24
RFC3P40938 AL031667.1-201ENST00000440222 725 ntBASIC1.07□□□□□ -2.24
RFC3P40938 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.07□□□□□ -2.24
RFC3P40938 RNU6-1037P-201ENST00000459571 107 ntBASIC1.07□□□□□ -2.24
RFC3P40938 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RFC3P40938 RNU6-612P-201ENST00000516909 102 ntBASIC1.07□□□□□ -2.24
RFC3P40938 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
RFC3P40938 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.07□□□□□ -2.24
RFC3P40938 MIR4753-201ENST00000585119 83 ntBASIC1.07□□□□□ -2.24
RFC3P40938 MIR6504-201ENST00000613520 61 ntBASIC1.07□□□□□ -2.24
RFC3P40938 AC005562.2-201ENST00000618264 111 ntBASIC1.07□□□□□ -2.24
RFC3P40938 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.07□□□□□ -2.24
RFC3P40938 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
RFC3P40938 RNU6-227P-201ENST00000362865 103 ntBASIC1.06□□□□□ -2.24
RFC3P40938 Y_RNA.159-201ENST00000363674 87 ntBASIC1.06□□□□□ -2.24
RFC3P40938 Y_RNA.191-201ENST00000363972 113 ntBASIC1.06□□□□□ -2.24
RFC3P40938 Y_RNA.269-201ENST00000364685 89 ntBASIC1.06□□□□□ -2.24
RFC3P40938 RNU6-1235P-201ENST00000384559 107 ntBASIC1.06□□□□□ -2.24
RFC3P40938 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
RFC3P40938 SNORD73A-201ENST00000386062 65 ntBASIC1.06□□□□□ -2.24
RFC3P40938 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
RFC3P40938 RPS26P42-201ENST00000413485 326 ntBASIC1.06□□□□□ -2.24
RFC3P40938 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.06□□□□□ -2.24
RFC3P40938 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
RFC3P40938 AL358934.1-201ENST00000432346 324 ntBASIC1.06□□□□□ -2.24
RFC3P40938 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.06□□□□□ -2.24
RFC3P40938 MTND1P27-201ENST00000451117 902 ntBASIC1.06□□□□□ -2.24
RFC3P40938 RNU6-498P-201ENST00000459468 107 ntBASIC1.06□□□□□ -2.24
RFC3P40938 RNU6-430P-201ENST00000517078 107 ntBASIC1.06□□□□□ -2.24
RFC3P40938 MTCO2P4-201ENST00000517968 247 ntBASIC1.06□□□□□ -2.24
RFC3P40938 RNU6-323P-201ENST00000521915 107 ntBASIC1.06□□□□□ -2.24
RFC3P40938 AC026470.2-201ENST00000561492 181 ntBASIC1.06□□□□□ -2.24
RFC3P40938 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.06□□□□□ -2.24
RFC3P40938 AL391840.1-201ENST00000571144 367 ntBASIC1.06□□□□□ -2.24
RFC3P40938 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.06□□□□□ -2.24
RFC3P40938 AC087683.2-201ENST00000611384 326 ntBASIC1.06□□□□□ -2.24
RFC3P40938 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.06□□□□□ -2.24
RFC3P40938 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.06□□□□□ -2.24
RFC3P40938 AC091931.1-201ENST00000623488 728 ntBASIC1.06□□□□□ -2.24
RFC3P40938 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
RFC3P40938 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RFC3P40938 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.05□□□□□ -2.24
RFC3P40938 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RFC3P40938 SNORA72.2-201ENST00000365028 127 ntBASIC1.05□□□□□ -2.24
RFC3P40938 RNU6-331P-201ENST00000384724 107 ntBASIC1.05□□□□□ -2.24
RFC3P40938 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
RFC3P40938 MTCYBP8-201ENST00000422855 651 ntBASIC1.05□□□□□ -2.24
RFC3P40938 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.05□□□□□ -2.24
RFC3P40938 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.05□□□□□ -2.24
RFC3P40938 AC073910.1-201ENST00000445047 438 ntBASIC1.05□□□□□ -2.24
RFC3P40938 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.05□□□□□ -2.24
RFC3P40938 snoU13.6-201ENST00000458785 104 ntBASIC1.05□□□□□ -2.24
RFC3P40938 RNU7-63P-201ENST00000459054 62 ntBASIC1.05□□□□□ -2.24
RFC3P40938 ARL2BPP4-201ENST00000506854 471 ntBASIC1.05□□□□□ -2.24
RFC3P40938 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.05□□□□□ -2.24
RFC3P40938 RNU6-948P-201ENST00000516374 107 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms