Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
RORAP35398 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.37□□□□□ -2.19
RORAP35398 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 USP9YP14-201ENST00000430663 563 ntBASIC1.37□□□□□ -2.19
RORAP35398 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 AC099677.2-201ENST00000436385 175 ntBASIC1.37□□□□□ -2.19
RORAP35398 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 AC005908.1-201ENST00000468701 347 ntBASIC1.37□□□□□ -2.19
RORAP35398 AC025465.4-201ENST00000513422 638 ntBASIC1.37□□□□□ -2.19
RORAP35398 RNA5SP401-201ENST00000515920 127 ntBASIC1.37□□□□□ -2.19
RORAP35398 RNU6-405P-201ENST00000516637 110 ntBASIC1.37□□□□□ -2.19
RORAP35398 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 AC025423.5-201ENST00000550230 219 ntBASIC1.37□□□□□ -2.19
RORAP35398 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.37□□□□□ -2.19
RORAP35398 SNORA59B-202ENST00000578183 701 ntBASIC1.37□□□□□ -2.19
RORAP35398 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.37□□□□□ -2.19
RORAP35398 AC092807.2-201ENST00000609367 243 ntBASIC1.37□□□□□ -2.19
RORAP35398 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RORAP35398 FAM157A-202ENST00000615155 405 ntBASIC1.37□□□□□ -2.19
RORAP35398 AC009541.1-201ENST00000438279 2662 ntBASIC1.36□□□□□ -2.19
RORAP35398 MTND5P10-201ENST00000603719 1809 ntBASIC1.36□□□□□ -2.19
RORAP35398 AL391987.6-201ENST00000305671 199 ntBASIC1.36□□□□□ -2.19
RORAP35398 SNORA7.1-201ENST00000363750 139 ntBASIC1.36□□□□□ -2.19
RORAP35398 RNU4-66P-201ENST00000365199 138 ntBASIC1.36□□□□□ -2.19
RORAP35398 RNU6-1329P-201ENST00000365664 107 ntBASIC1.36□□□□□ -2.19
RORAP35398 RNY3P9-201ENST00000384727 106 ntBASIC1.36□□□□□ -2.19
RORAP35398 TIMM9P3-201ENST00000428659 274 ntBASIC1.36□□□□□ -2.19
RORAP35398 RNU6-1037P-201ENST00000459571 107 ntBASIC1.36□□□□□ -2.19
RORAP35398 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
RORAP35398 SUMO2P18-201ENST00000518873 252 ntBASIC1.36□□□□□ -2.19
RORAP35398 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.36□□□□□ -2.19
RORAP35398 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.36□□□□□ -2.19
RORAP35398 AC090517.1-201ENST00000569307 266 ntBASIC1.36□□□□□ -2.19
RORAP35398 MIR5094-201ENST00000578766 85 ntBASIC1.36□□□□□ -2.19
RORAP35398 RPL17P51-201ENST00000605218 238 ntBASIC1.36□□□□□ -2.19
RORAP35398 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.36□□□□□ -2.19
RORAP35398 AC064807.4-201ENST00000607201 407 ntBASIC1.36□□□□□ -2.19
RORAP35398 Z99129.1-201ENST00000612510 255 ntBASIC1.36□□□□□ -2.19
RORAP35398 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
RORAP35398 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.36□□□□□ -2.19
RORAP35398 AC097520.1-201ENST00000624435 385 ntBASIC1.36□□□□□ -2.19
RORAP35398 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RORAP35398 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
RORAP35398 Y_RNA.51-201ENST00000362725 102 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU6-227P-201ENST00000362865 103 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU5B-2P-201ENST00000363036 113 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU6-522P-201ENST00000364497 107 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU6-1317P-201ENST00000364582 104 ntBASIC1.35□□□□□ -2.19
RORAP35398 SNORA18.2-201ENST00000383865 132 ntBASIC1.35□□□□□ -2.19
RORAP35398 SNORA29-201ENST00000384183 140 ntBASIC1.35□□□□□ -2.19
RORAP35398 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
RORAP35398 CALM2P3-201ENST00000400429 449 ntBASIC1.35□□□□□ -2.19
RORAP35398 SDAD1P3-201ENST00000427380 333 ntBASIC1.35□□□□□ -2.19
RORAP35398 MTND3P9-201ENST00000429526 346 ntBASIC1.35□□□□□ -2.19
RORAP35398 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.35□□□□□ -2.19
RORAP35398 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
RORAP35398 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.35□□□□□ -2.19
RORAP35398 MTND3P16-201ENST00000452205 344 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU6-1208P-201ENST00000459588 107 ntBASIC1.35□□□□□ -2.19
RORAP35398 Y_RNA.654-201ENST00000497848 106 ntBASIC1.35□□□□□ -2.19
RORAP35398 AC092436.3-201ENST00000511788 257 ntBASIC1.35□□□□□ -2.19
RORAP35398 SNORD60.2-201ENST00000516883 86 ntBASIC1.35□□□□□ -2.19
RORAP35398 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
RORAP35398 AC087854.1-201ENST00000519706 414 ntBASIC1.35□□□□□ -2.19
RORAP35398 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.35□□□□□ -2.19
RORAP35398 SCOCP1-201ENST00000554676 349 ntBASIC1.35□□□□□ -2.19
RORAP35398 AC245008.1-201ENST00000608123 476 ntBASIC1.35□□□□□ -2.19
RORAP35398 MIR6863-201ENST00000636112 90 ntBASIC1.35□□□□□ -2.19
RORAP35398 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RORAP35398 RNU6-414P-201ENST00000363705 104 ntBASIC1.34□□□□□ -2.19
RORAP35398 RNU6-1322P-201ENST00000364309 107 ntBASIC1.34□□□□□ -2.19
RORAP35398 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
RORAP35398 RNU6-1026P-201ENST00000384465 108 ntBASIC1.34□□□□□ -2.19
RORAP35398 SNORD37.1-201ENST00000390968 65 ntBASIC1.34□□□□□ -2.19
RORAP35398 RNU6-780P-201ENST00000391030 104 ntBASIC1.34□□□□□ -2.19
RORAP35398 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
RORAP35398 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
RORAP35398 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
RORAP35398 AC004866.1-201ENST00000411748 78 ntBASIC1.34□□□□□ -2.19
RORAP35398 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
RORAP35398 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RORAP35398 AC245047.4-201ENST00000433189 144 ntBASIC1.34□□□□□ -2.19
RORAP35398 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.34□□□□□ -2.19
RORAP35398 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RORAP35398 HSPE1P24-201ENST00000450782 238 ntBASIC1.34□□□□□ -2.19
RORAP35398 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.34□□□□□ -2.19
RORAP35398 SRRM1P2-201ENST00000464531 1192 ntBASIC1.34□□□□□ -2.19
RORAP35398 AC087477.1-201ENST00000465747 340 ntBASIC1.34□□□□□ -2.19
RORAP35398 RPL9P9-202ENST00000466501 579 ntBASIC1.34□□□□□ -2.19
RORAP35398 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.34□□□□□ -2.19
RORAP35398 HMGN1P13-201ENST00000505795 138 ntBASIC1.34□□□□□ -2.19
RORAP35398 MRPS36P4-201ENST00000534436 298 ntBASIC1.34□□□□□ -2.19
RORAP35398 AL157687.1-201ENST00000554853 619 ntBASIC1.34□□□□□ -2.19
RORAP35398 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
RORAP35398 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
RORAP35398 AL357078.3-201ENST00000607528 618 ntBASIC1.34□□□□□ -2.19
RORAP35398 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.34□□□□□ -2.19
RORAP35398 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms