Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.07□□□□□ -2.42
CKS2P33552 RNU6-567P-201ENST00000516746 107 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AC087854.1-201ENST00000519706 414 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
CKS2P33552 MTND4LP25-201ENST00000570218 163 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AL391840.1-201ENST00000571144 367 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 MIR4667-201ENST00000578933 66 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AC012467.1-201ENST00000607740 256 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.07□□□□□ -2.42
CKS2P33552 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.07□□□□□ -2.42
CKS2P33552 AL356596.1-201ENST00000624230 379 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 AL157786.1-207ENST00000627771 695 ntBASIC-0.07□□□□□ -2.42
CKS2P33552 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
CKS2P33552 RNU6-428P-201ENST00000362942 107 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 RNA5SP264-201ENST00000363115 107 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 RNA5SP62-201ENST00000363457 110 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 MIR1253-201ENST00000408273 105 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 RNA5SP193-201ENST00000410353 107 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 CDK8P2-201ENST00000415020 547 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.08□□□□□ -2.42
CKS2P33552 MTCO2P7-201ENST00000446518 666 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.08□□□□□ -2.42
CKS2P33552 AC091874.1-201ENST00000511402 339 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 AP000889.1-201ENST00000530968 660 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 AC234772.3-201ENST00000602277 528 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.08□□□□□ -2.42
CKS2P33552 AC064807.4-201ENST00000607201 407 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 AL136317.1-201ENST00000612653 226 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 SEPT14P17-201ENST00000617978 177 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 AC006386.1-201ENST00000619436 415 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.08□□□□□ -2.42
CKS2P33552 AL163152.1-201ENST00000642001 374 ntBASIC-0.08□□□□□ -2.42
CKS2P33552 RNU6-37P-201ENST00000362692 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-11P-201ENST00000364234 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-25P-201ENST00000383873 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-1-201ENST00000383898 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-48P-201ENST00000384161 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-36P-201ENST00000384172 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-4P-201ENST00000384205 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-5P-201ENST00000384238 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-3P-201ENST00000384314 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-45P-201ENST00000384471 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-15P-201ENST00000384534 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-2-201ENST00000384627 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-29P-201ENST00000384637 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-9-201ENST00000384776 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-33P-201ENST00000384793 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 SNORD105-201ENST00000386910 85 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 MIR1276-201ENST00000408707 83 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNA5SP247-201ENST00000411181 105 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 MTND3P17-201ENST00000416968 344 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AL353777.1-201ENST00000425552 326 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.09□□□□□ -2.42
CKS2P33552 AC013470.1-201ENST00000453438 462 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 MTND1P12-201ENST00000455231 147 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AC079382.1-201ENST00000493346 557 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.09□□□□□ -2.42
CKS2P33552 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.09□□□□□ -2.42
CKS2P33552 MTND1P22-201ENST00000510572 951 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 SNORD111.1-201ENST00000516421 86 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU7-128P-201ENST00000517247 62 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.09□□□□□ -2.42
CKS2P33552 AP003716.2-201ENST00000528260 108 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.09□□□□□ -2.42
CKS2P33552 AC087894.1-201ENST00000538359 518 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AC004584.2-201ENST00000570407 410 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 EIF1P4-201ENST00000572664 335 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 MIR3192-201ENST00000584920 77 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AC008521.1-201ENST00000587471 187 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AL162424.1-201ENST00000602325 221 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-6P-201ENST00000606623 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AL139022.2-201ENST00000606934 443 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 RNU6-94P-201ENST00000607728 107 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 AL359075.3-201ENST00000613288 217 ntBASIC-0.09□□□□□ -2.42
CKS2P33552 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.09□□□□□ -2.42
CKS2P33552 AL589743.1-201ENST00000551932 2712 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 RNY4P24-201ENST00000362735 96 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 RNU1-133P-201ENST00000364867 167 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 SNORA24.1-201ENST00000384401 135 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 RPS29P13-201ENST00000402041 169 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 MTND3P20-201ENST00000407663 186 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.1□□□□□ -2.43
CKS2P33552 AC090960.1-201ENST00000421072 306 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 STAG3L5P-204ENST00000443759 179 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 MTCO2P18-201ENST00000457151 658 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 AC010486.2-201ENST00000505572 483 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS2P33552 RNU6-201P-201ENST00000517100 61 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.1□□□□□ -2.43
CKS2P33552 AC008507.2-201ENST00000588402 1176 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 AL158042.1-201ENST00000605338 460 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 SNORA43.4-201ENST00000629559 138 ntBASIC-0.1□□□□□ -2.43
CKS2P33552 AL390237.1-201ENST00000404226 1415 ntBASIC-0.11□□□□□ -2.43
CKS2P33552 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.11□□□□□ -2.43
CKS2P33552 MIR103A2-201ENST00000362154 78 ntBASIC-0.11□□□□□ -2.43
CKS2P33552 SNORD114-16-201ENST00000363044 70 ntBASIC-0.11□□□□□ -2.43
CKS2P33552 RNA5SP511-201ENST00000410487 115 ntBASIC-0.11□□□□□ -2.43
CKS2P33552 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms