Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RNU6-174P-201ENST00000410406 106 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC8P31273 AL353997.1-201ENST00000432936 108 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC8P31273 AC243964.1-201ENST00000441814 261 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 Y_RNA.639-201ENST00000458981 102 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 RPS29P27-201ENST00000463711 170 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 SNRPGP7-201ENST00000469016 106 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 AL121594.1-201ENST00000475906 575 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 AC108210.2-201ENST00000503681 201 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.36□□□□□ -2.03
HOXC8P31273 AC115990.1-201ENST00000526957 301 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 AC020661.2-201ENST00000560114 134 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 MIR8076-201ENST00000611401 83 ntBASIC2.36□□□□□ -2.03
HOXC8P31273 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC8P31273 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC8P31273 RNU6-227P-201ENST00000362865 103 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 Y_RNA.123-201ENST00000363338 102 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 Y_RNA.197-201ENST00000364004 102 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 DEFA7P-201ENST00000382676 285 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 RNU6-482P-201ENST00000391068 107 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 MIR548P-201ENST00000408336 84 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC243428.1-201ENST00000421099 264 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 MTCYBP6-201ENST00000441810 138 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC8P31273 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC114801.2-201ENST00000503825 781 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC022493.2-201ENST00000506122 481 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC8P31273 AP003072.1-201ENST00000531740 145 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 CBX3P8-201ENST00000532412 525 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC8P31273 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.35□□□□□ -2.03
HOXC8P31273 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HOXC8P31273 BNIP3P16-201ENST00000589779 534 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC078795.3-201ENST00000602913 472 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AP001836.1-201ENST00000604675 523 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC025754.2-201ENST00000606491 432 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 AC134503.1-201ENST00000633048 54 ntBASIC2.35□□□□□ -2.03
HOXC8P31273 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC8P31273 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC8P31273 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HOXC8P31273 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXC8P31273 AL356292.1-201ENST00000283110 373 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 SNORA63-201ENST00000363450 132 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 Y_RNA.216-201ENST00000364205 93 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 U3.13-201ENST00000364804 214 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 RNU6-596P-201ENST00000365395 98 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 Y_RNA.533-201ENST00000384596 114 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 RNU6-1222P-201ENST00000384615 107 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 MIR29B2-201ENST00000385055 81 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 BTF3L4P2-201ENST00000392798 346 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC8P31273 AC007969.2-201ENST00000441891 191 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 AL031659.1-201ENST00000447075 539 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXC8P31273 snoU13.14-201ENST00000459372 104 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 Y_RNA.631-201ENST00000459607 101 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 AC009127.3-201ENST00000570531 403 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 MIR3171-201ENST00000584270 74 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 VN1R107P-201ENST00000601784 209 ntBASIC2.34□□□□□ -2.03
HOXC8P31273 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
HOXC8P31273 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HOXC8P31273 AC009541.1-201ENST00000438279 2662 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 RNU6-1115P-201ENST00000362490 106 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 Y_RNA.31-201ENST00000362574 102 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 SNORD50.1-201ENST00000362987 71 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 Y_RNA.128-201ENST00000363391 112 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 SNORA25B-201ENST00000365507 128 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 MIR559-201ENST00000385188 96 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 AL591034.2-201ENST00000402839 359 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 AP000275.1-201ENST00000411943 390 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 AC091874.1-201ENST00000511402 339 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.33□□□□□ -2.04
HOXC8P31273 RNU6-470P-201ENST00000515954 104 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 RNU6-307P-201ENST00000516743 106 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC8P31273 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.33□□□□□ -2.04
HOXC8P31273 AC005899.2-201ENST00000584353 90 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 CYP2C61P-201ENST00000604072 290 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 uc_338.22-201ENST00000622722 187 ntBASIC2.33□□□□□ -2.04
HOXC8P31273 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
HOXC8P31273 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.32□□□□□ -2.04
HOXC8P31273 AC009487.4-201ENST00000624969 3585 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC8P31273 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HOXC8P31273 MTND5P9-201ENST00000503854 1755 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 Y_RNA.395-201ENST00000383945 109 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 AL139156.1-201ENST00000412785 841 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.32□□□□□ -2.04
HOXC8P31273 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.32□□□□□ -2.04
HOXC8P31273 RPL30P1-201ENST00000488676 339 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 AC022447.4-201ENST00000504053 364 ntBASIC2.32□□□□□ -2.04
HOXC8P31273 SNORA4.4-201ENST00000515921 135 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms