Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.332-201ENST00000365271 113 ntBASIC1.81□□□□□ -2.12
RPA1P27694 MIR597-201ENST00000384968 97 ntBASIC1.81□□□□□ -2.12
RPA1P27694 EIF4E2P1-201ENST00000393781 255 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AL356776.1-201ENST00000406574 447 ntBASIC1.81□□□□□ -2.12
RPA1P27694 PPP1R2P5-201ENST00000457256 603 ntBASIC1.81□□□□□ -2.12
RPA1P27694 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.81□□□□□ -2.12
RPA1P27694 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.81□□□□□ -2.12
RPA1P27694 AC018710.1-201ENST00000506509 158 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AK3P2-201ENST00000507976 429 ntBASIC1.81□□□□□ -2.12
RPA1P27694 RNU4-49P-201ENST00000516080 140 ntBASIC1.81□□□□□ -2.12
RPA1P27694 RNU6-991P-201ENST00000516168 107 ntBASIC1.81□□□□□ -2.12
RPA1P27694 SNORA31.16-201ENST00000516773 139 ntBASIC1.81□□□□□ -2.12
RPA1P27694 RNA5SP490-201ENST00000517141 136 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.81□□□□□ -2.12
RPA1P27694 HSPE1P4-201ENST00000550617 308 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
RPA1P27694 MIR3198-2-201ENST00000577868 80 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AC005786.1-201ENST00000588553 154 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AC060780.3-201ENST00000589464 80 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.81□□□□□ -2.12
RPA1P27694 AL138726.1-201ENST00000614873 333 ntBASIC1.81□□□□□ -2.12
RPA1P27694 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.81□□□□□ -2.12
RPA1P27694 SNORA43.4-201ENST00000629559 138 ntBASIC1.81□□□□□ -2.12
RPA1P27694 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RPA1P27694 CASC19-280ENST00000642102 1351 ntBASIC1.81□□□□□ -2.12
RPA1P27694 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
RPA1P27694 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPA1P27694 Y_RNA.151-201ENST00000363566 112 ntBASIC1.8□□□□□ -2.12
RPA1P27694 SNORD113-7-201ENST00000363762 77 ntBASIC1.8□□□□□ -2.12
RPA1P27694 Y_RNA.212-201ENST00000364177 102 ntBASIC1.8□□□□□ -2.12
RPA1P27694 Y_RNA.301-201ENST00000364990 103 ntBASIC1.8□□□□□ -2.12
RPA1P27694 RNU6-234P-201ENST00000365229 104 ntBASIC1.8□□□□□ -2.12
RPA1P27694 RNU6-95P-201ENST00000384697 107 ntBASIC1.8□□□□□ -2.12
RPA1P27694 RN7SKP101-201ENST00000411376 320 ntBASIC1.8□□□□□ -2.12
RPA1P27694 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.8□□□□□ -2.12
RPA1P27694 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
RPA1P27694 FTH1P25-201ENST00000447665 469 ntBASIC1.8□□□□□ -2.12
RPA1P27694 HMGN2P18-201ENST00000450680 270 ntBASIC1.8□□□□□ -2.12
RPA1P27694 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.8□□□□□ -2.12
RPA1P27694 AC027575.1-201ENST00000481064 460 ntBASIC1.8□□□□□ -2.12
RPA1P27694 HMGB3P17-201ENST00000504195 649 ntBASIC1.8□□□□□ -2.12
RPA1P27694 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPA1P27694 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
RPA1P27694 RNU6-256P-201ENST00000516747 97 ntBASIC1.8□□□□□ -2.12
RPA1P27694 AF235103.2-201ENST00000525753 346 ntBASIC1.8□□□□□ -2.12
RPA1P27694 HSBP1P1-201ENST00000555205 166 ntBASIC1.8□□□□□ -2.12
RPA1P27694 MIR6715A-201ENST00000615929 79 ntBASIC1.8□□□□□ -2.12
RPA1P27694 AC006026.1-201ENST00000444025 1803 ntBASIC1.8□□□□□ -2.12
RPA1P27694 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RPA1P27694 Y_RNA.135-201ENST00000363439 95 ntBASIC1.79□□□□□ -2.12
RPA1P27694 RNU6-1059P-201ENST00000363752 98 ntBASIC1.79□□□□□ -2.12
RPA1P27694 U3.9-201ENST00000363823 204 ntBASIC1.79□□□□□ -2.12
RPA1P27694 RNA5SP493-201ENST00000364115 91 ntBASIC1.79□□□□□ -2.12
RPA1P27694 Y_RNA.414-201ENST00000384011 101 ntBASIC1.79□□□□□ -2.12
RPA1P27694 MIR487A-201ENST00000385009 80 ntBASIC1.79□□□□□ -2.12
RPA1P27694 SNORA12-201ENST00000391162 147 ntBASIC1.79□□□□□ -2.12
RPA1P27694 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.79□□□□□ -2.12
RPA1P27694 RNU6-325P-201ENST00000411132 105 ntBASIC1.79□□□□□ -2.12
RPA1P27694 PDCL2P1-201ENST00000419302 352 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC123900.1-201ENST00000420390 96 ntBASIC1.79□□□□□ -2.12
RPA1P27694 MTND3P9-201ENST00000429526 346 ntBASIC1.79□□□□□ -2.12
RPA1P27694 NDUFA5P4-201ENST00000436704 385 ntBASIC1.79□□□□□ -2.12
RPA1P27694 MTATP6P13-201ENST00000438531 667 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AL359672.1-201ENST00000442302 409 ntBASIC1.79□□□□□ -2.12
RPA1P27694 SNORD13-201ENST00000459299 104 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.79□□□□□ -2.12
RPA1P27694 MRPS36P4-201ENST00000534436 298 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC021231.3-201ENST00000558497 370 ntBASIC1.79□□□□□ -2.12
RPA1P27694 SNORA59B-202ENST00000578183 701 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC104984.5-201ENST00000586878 94 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC018638.8-201ENST00000588755 281 ntBASIC1.79□□□□□ -2.12
RPA1P27694 MIR3976-201ENST00000606807 139 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
RPA1P27694 U6atac.1-201ENST00000616025 117 ntBASIC1.79□□□□□ -2.12
RPA1P27694 AC009248.2-201ENST00000619826 254 ntBASIC1.79□□□□□ -2.12
RPA1P27694 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RPA1P27694 MTND4P23-201ENST00000447723 1363 ntBASIC1.79□□□□□ -2.12
RPA1P27694 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
RPA1P27694 LINC02555-201ENST00000563933 1951 ntBASIC1.78□□□□□ -2.12
RPA1P27694 Y_RNA.184-201ENST00000363884 108 ntBASIC1.78□□□□□ -2.12
RPA1P27694 RNU6-306P-201ENST00000384617 107 ntBASIC1.78□□□□□ -2.12
RPA1P27694 MIR549A-201ENST00000385268 96 ntBASIC1.78□□□□□ -2.12
RPA1P27694 MT-TL1-201ENST00000386347 75 ntBASIC1.78□□□□□ -2.12
RPA1P27694 RNA5SP201-201ENST00000410316 124 ntBASIC1.78□□□□□ -2.12
RPA1P27694 AC007547.1-201ENST00000462177 490 ntBASIC1.78□□□□□ -2.12
RPA1P27694 RNU6-864P-201ENST00000516256 108 ntBASIC1.78□□□□□ -2.12
RPA1P27694 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.78□□□□□ -2.12
RPA1P27694 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.78□□□□□ -2.12
RPA1P27694 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.78□□□□□ -2.12
RPA1P27694 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPA1P27694 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
RPA1P27694 RNU1-17P-201ENST00000363022 152 ntBASIC1.77□□□□□ -2.13
RPA1P27694 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPA1P27694 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
RPA1P27694 RNU4-14P-201ENST00000410858 122 ntBASIC1.77□□□□□ -2.13
RPA1P27694 NCOR1P3-201ENST00000420479 303 ntBASIC1.77□□□□□ -2.13
RPA1P27694 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
RPA1P27694 MTCO2P3-201ENST00000442543 421 ntBASIC1.77□□□□□ -2.13
RPA1P27694 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.77□□□□□ -2.13
RPA1P27694 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms