Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC073869.6-201ENST00000640656 341 ntBASIC1.05□□□□□ -2.24
COL5A3P25940 RNU6-552P-201ENST00000362869 119 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-529P-201ENST00000363383 104 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-17P-201ENST00000384245 107 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-45P-201ENST00000384471 107 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-18P-201ENST00000384527 107 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 Y_RNA.559-201ENST00000384686 107 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-1106P-201ENST00000390845 107 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-192P-201ENST00000391253 100 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU2-16P-201ENST00000410712 136 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AL591043.1-201ENST00000432461 424 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AC018437.1-201ENST00000492214 406 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AC091435.1-201ENST00000505442 584 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AC091885.1-201ENST00000506658 268 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.04□□□□□ -2.24
COL5A3P25940 SMURF2P1-201ENST00000514992 481 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 Y_RNA.655-201ENST00000515919 96 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RNU6-720P-201ENST00000516363 108 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 SNORA43.2-201ENST00000516652 128 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.04□□□□□ -2.24
COL5A3P25940 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.04□□□□□ -2.24
COL5A3P25940 AC073539.2-201ENST00000597113 165 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AL713866.2-201ENST00000603579 219 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 AC026585.1-201ENST00000619582 524 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 RMST_7.1-201ENST00000621935 268 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 Z69720.2-201ENST00000624755 279 ntBASIC1.04□□□□□ -2.24
COL5A3P25940 Y_RNA.3-201ENST00000362331 103 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 SNORD114-2-201ENST00000363953 78 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 U3.13-201ENST00000364804 214 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNA5SP331-201ENST00000364986 107 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 Y_RNA.373-201ENST00000365600 103 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 Y_RNA.554-201ENST00000384672 102 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 SNORA16.2-201ENST00000390991 127 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 UBE2V1P10-201ENST00000414685 269 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 MTCO1P20-201ENST00000425366 358 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 USP9YP18-201ENST00000425912 695 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 CYP2C59P-201ENST00000457790 269 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU1-98P-201ENST00000458992 160 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 SNORA14.1-201ENST00000516113 141 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU6-1038P-201ENST00000516516 104 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC023050.3-201ENST00000541142 333 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 HMGB1P33-201ENST00000563485 527 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AP001330.5-201ENST00000607176 411 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC092954.2-201ENST00000609103 430 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC126177.8-201ENST00000618339 1015 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 MTND5P9-201ENST00000503854 1755 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL5A3P25940 RNU1-72P-201ENST00000362976 153 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 Y_RNA.378-201ENST00000365652 113 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 SNORD73A-201ENST00000386062 65 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU6-955P-201ENST00000410497 104 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU2-23P-201ENST00000410545 195 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 AC010975.2-201ENST00000427781 588 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.03□□□□□ -2.24
COL5A3P25940 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.03□□□□□ -2.24
COL5A3P25940 MTND3P21-201ENST00000433774 331 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC073415.1-201ENST00000449240 153 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 AC011005.2-201ENST00000487324 359 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU5F-2P-201ENST00000516066 82 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU6-1069P-201ENST00000516612 133 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.03□□□□□ -2.24
COL5A3P25940 AL137161.1-201ENST00000532231 390 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.03□□□□□ -2.24
COL5A3P25940 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.03□□□□□ -2.24
COL5A3P25940 AL773524.1-201ENST00000614065 229 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 AL359880.1-201ENST00000621879 266 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 MIR1321-201ENST00000637766 79 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 U4.7-201ENST00000638126 106 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.03□□□□□ -2.24
COL5A3P25940 RNU6-715P-201ENST00000365204 103 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 RNU6-38P-201ENST00000384085 107 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 SNORD37.1-201ENST00000390968 65 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AC013470.1-201ENST00000453438 462 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.02□□□□□ -2.25
COL5A3P25940 RNU6-333P-201ENST00000459117 107 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AP001324.2-201ENST00000461163 319 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AC083798.1-201ENST00000472671 131 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.02□□□□□ -2.25
COL5A3P25940 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.02□□□□□ -2.25
COL5A3P25940 AC026371.1-201ENST00000551867 419 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.02□□□□□ -2.25
COL5A3P25940 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.02□□□□□ -2.25
COL5A3P25940 ELOCP5-201ENST00000604924 333 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 Z82243.1-201ENST00000609432 473 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 DISC2.1-201ENST00000612827 205 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 uc_338.15-201ENST00000615470 191 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 RMST_4.1-201ENST00000616886 107 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 AC024614.3-201ENST00000637860 256 ntBASIC1.02□□□□□ -2.25
COL5A3P25940 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
COL5A3P25940 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL5A3P25940 SNORD56.1-201ENST00000362913 68 ntBASIC1.01□□□□□ -2.25
COL5A3P25940 Y_RNA.399-201ENST00000383955 105 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms