Protein–RNA interactions for Protein: P20393

NR1D1, Nuclear receptor subfamily 1 group D member 1, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1P20393 RNA5SP37-201ENST00000365420 130 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AC117470.1-201ENST00000381974 330 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 MIR518C-201ENST00000384822 101 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 MIR544A-201ENST00000384855 91 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AL133475.1-201ENST00000404414 305 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 MTCYBP2-201ENST00000407745 171 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 RN7SKP61-201ENST00000410642 295 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 MCFD2P1-201ENST00000417812 300 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.37□□□□□ -2.03
NR1D1P20393 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.37□□□□□ -2.03
NR1D1P20393 AC079354.2-201ENST00000453523 154 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.37□□□□□ -2.03
NR1D1P20393 RN7SKP210-201ENST00000459176 261 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 RPL36AP48-201ENST00000485521 314 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AC022447.4-201ENST00000504053 364 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 HMGB3P3-201ENST00000510526 400 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 RNU6-699P-201ENST00000517081 110 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.37□□□□□ -2.03
NR1D1P20393 AC015712.3-201ENST00000559380 164 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
NR1D1P20393 RPS15AP11-201ENST00000594193 385 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 7SK.7-201ENST00000603504 247 ntBASIC2.37□□□□□ -2.03
NR1D1P20393 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NR1D1P20393 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 SNORD114-19-201ENST00000363072 75 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 Y_RNA.123-201ENST00000363338 102 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RNU6-1032P-201ENST00000384100 107 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 Y_RNA.496-201ENST00000384444 101 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RNU2-23P-201ENST00000410545 195 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RN7SKP192-201ENST00000411291 327 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.36□□□□□ -2.03
NR1D1P20393 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.36□□□□□ -2.03
NR1D1P20393 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.36□□□□□ -2.03
NR1D1P20393 AC097463.2-201ENST00000421074 142 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AC099799.1-201ENST00000439809 192 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 RPL30P10-201ENST00000488148 337 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AC016632.1-201ENST00000503994 196 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.36□□□□□ -2.03
NR1D1P20393 CBX3P8-201ENST00000532412 525 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AC025754.2-201ENST00000606491 432 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AC083806.3-201ENST00000614016 455 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.36□□□□□ -2.03
NR1D1P20393 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
NR1D1P20393 ZNF72P-201ENST00000425869 1908 ntBASIC2.36□□□□□ -2.03
NR1D1P20393 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
NR1D1P20393 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NR1D1P20393 AC092268.1-201ENST00000342691 405 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.35□□□□□ -2.03
NR1D1P20393 RNY1P16-201ENST00000363063 111 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 RNU6-1285P-201ENST00000363480 105 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 RNU1-115P-201ENST00000365329 160 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 RNY1P14-201ENST00000384426 108 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 Y_RNA.577-201ENST00000384794 101 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
NR1D1P20393 AC008267.5-201ENST00000424928 265 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AL139109.1-201ENST00000455491 297 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC112771.1-201ENST00000463581 102 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 FO393415.2-201ENST00000480085 343 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC104564.1-201ENST00000493028 407 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 RNU6-120P-201ENST00000516077 103 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC079598.5-201ENST00000547460 117 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.35□□□□□ -2.03
NR1D1P20393 MIR5701-3-201ENST00000578890 82 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 MIR5701-1-201ENST00000585138 82 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
NR1D1P20393 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.35□□□□□ -2.03
NR1D1P20393 AC005014.2-201ENST00000607795 599 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 MIR5701-2-201ENST00000615634 82 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC137590.2-201ENST00000619709 240 ntBASIC2.35□□□□□ -2.03
NR1D1P20393 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.35□□□□□ -2.03
NR1D1P20393 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
NR1D1P20393 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NR1D1P20393 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NR1D1P20393 Y_RNA.158-201ENST00000363651 101 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 RNU6-1286P-201ENST00000383871 107 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 Y_RNA.428-201ENST00000384078 102 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 Y_RNA.533-201ENST00000384596 114 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 RNU6-700P-201ENST00000391043 107 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 RNA5SP425-201ENST00000410336 112 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1D1P20393 MTCYBP10-201ENST00000424905 650 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1D1P20393 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1D1P20393 AL353705.4-201ENST00000449661 238 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 snoU13.14-201ENST00000459372 104 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.34□□□□□ -2.03
NR1D1P20393 RN7SL636P-201ENST00000497504 294 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.34□□□□□ -2.03
NR1D1P20393 SNORA25.10-201ENST00000515926 124 ntBASIC2.34□□□□□ -2.03
NR1D1P20393 SNORD116.3-201ENST00000517176 78 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms