Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNORD116-11-201ENST00000383882 92 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 RNU6-790P-201ENST00000384479 105 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PDGFRAP16234 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 SNORA40.18-201ENST00000391200 128 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AC244636.1-201ENST00000421152 228 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 EIF4EP2-201ENST00000422816 654 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 SNRPEP8-201ENST00000442866 260 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFRAP16234 AC016925.1-201ENST00000458303 298 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AF186996.7-201ENST00000492781 209 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFRAP16234 RNU6-295P-201ENST00000516901 104 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFRAP16234 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.95□□□□□ -2.1
PDGFRAP16234 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.95□□□□□ -2.1
PDGFRAP16234 RMST_6.1-201ENST00000611980 203 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AL590240.4-201ENST00000616908 390 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 AC137590.2-201ENST00000619709 240 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 MIR3662-201ENST00000637030 95 ntBASIC1.95□□□□□ -2.1
PDGFRAP16234 SNORD50.1-201ENST00000362987 71 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 MIR764-201ENST00000390811 85 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFRAP16234 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFRAP16234 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.94□□□□□ -2.1
PDGFRAP16234 DAP3P1-201ENST00000441522 278 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 OR2AQ1P-201ENST00000451972 200 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 AC007215.1-201ENST00000464893 276 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFRAP16234 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFRAP16234 RNU6-718P-201ENST00000516166 105 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 RNU6-864P-201ENST00000516256 108 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.94□□□□□ -2.1
PDGFRAP16234 AC026470.2-201ENST00000561492 181 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.94□□□□□ -2.1
PDGFRAP16234 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.94□□□□□ -2.1
PDGFRAP16234 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 AC027514.1-201ENST00000588561 1603 ntBASIC1.94□□□□□ -2.1
PDGFRAP16234 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 SNORA18.2-201ENST00000383865 132 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AL591806.2-201ENST00000433122 173 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFRAP16234 AC079354.2-201ENST00000453523 154 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AC130509.1-201ENST00000464158 433 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 RPL23AP75-201ENST00000491601 451 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 RPL23AP63-201ENST00000498752 471 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 MTCO2P30-201ENST00000503662 364 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 DEFB131C-201ENST00000528817 165 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
PDGFRAP16234 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFRAP16234 MIR3942-201ENST00000585264 109 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 POLR3GP2-201ENST00000588366 668 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AC011494.1-201ENST00000596454 237 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AC016727.2-201ENST00000603988 621 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AC005562.2-201ENST00000618264 111 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AL359757.2-201ENST00000624309 274 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFRAP16234 AC100810.6-201ENST00000638068 285 ntBASIC1.93□□□□□ -2.1
PDGFRAP16234 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
PDGFRAP16234 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PDGFRAP16234 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.92□□□□□ -2.1
PDGFRAP16234 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
PDGFRAP16234 CBX3P1-201ENST00000325243 554 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 RNU6-1026P-201ENST00000384465 108 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 MIR517A-201ENST00000385001 87 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 MIR1277-201ENST00000408536 78 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 Y_RNA.599-201ENST00000410489 109 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 RNU6-1148P-201ENST00000410992 104 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.92□□□□□ -2.1
PDGFRAP16234 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFRAP16234 AC007395.1-201ENST00000451333 677 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC087477.1-201ENST00000465747 340 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC092989.1-201ENST00000481235 277 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.92□□□□□ -2.1
PDGFRAP16234 AC107393.1-201ENST00000512403 346 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 RNA5SP182-201ENST00000516064 82 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.92□□□□□ -2.1
PDGFRAP16234 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.92□□□□□ -2.1
PDGFRAP16234 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.92□□□□□ -2.1
PDGFRAP16234 AC005786.1-201ENST00000588553 154 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 AC019193.3-201ENST00000609144 554 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.92□□□□□ -2.1
PDGFRAP16234 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
PDGFRAP16234 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
PDGFRAP16234 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
PDGFRAP16234 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
PDGFRAP16234 RNU6-831P-201ENST00000384548 107 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PDGFRAP16234 MIR300-201ENST00000401138 83 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 Y_RNA.619-201ENST00000410951 90 ntBASIC1.91□□□□□ -2.1
PDGFRAP16234 FCF1P9-201ENST00000412546 282 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms