Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.28□□□□□ -2.62
VCANP13611 AC098483.2-201ENST00000603158 454 ntBASIC-1.28□□□□□ -2.62
VCANP13611 AC004241.3-201ENST00000611728 517 ntBASIC-1.28□□□□□ -2.62
VCANP13611 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-1.28□□□□□ -2.62
VCANP13611 RNU2-21P-201ENST00000410368 188 ntBASIC-1.29□□□□□ -2.62
VCANP13611 RNA5SP261-201ENST00000410536 106 ntBASIC-1.29□□□□□ -2.62
VCANP13611 RNU6-803P-201ENST00000516034 102 ntBASIC-1.29□□□□□ -2.62
VCANP13611 AP001981.2-201ENST00000603241 418 ntBASIC-1.29□□□□□ -2.62
VCANP13611 AC009318.4-201ENST00000620496 486 ntBASIC-1.29□□□□□ -2.62
VCANP13611 RNU6-83P-201ENST00000384568 112 ntBASIC-1.29□□□□□ -2.62
VCANP13611 MIR527-201ENST00000385244 85 ntBASIC-1.29□□□□□ -2.62
VCANP13611 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-1.29□□□□□ -2.62
VCANP13611 HSFY7P-201ENST00000432672 318 ntBASIC-1.29□□□□□ -2.62
VCANP13611 HSFY8P-201ENST00000437934 318 ntBASIC-1.29□□□□□ -2.62
VCANP13611 HSFY5P-201ENST00000453726 309 ntBASIC-1.29□□□□□ -2.62
VCANP13611 AC093726.3-201ENST00000637588 150 ntBASIC-1.29□□□□□ -2.62
VCANP13611 MTCO1P21-201ENST00000416634 589 ntBASIC-1.3□□□□□ -2.62
VCANP13611 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-1.3□□□□□ -2.62
VCANP13611 AL583856.2-201ENST00000606298 543 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AL391834.1-201ENST00000609609 560 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AC004908.3-201ENST00000610248 625 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-1.3□□□□□ -2.62
VCANP13611 C8orf59P1-201ENST00000429930 303 ntBASIC-1.3□□□□□ -2.62
VCANP13611 MTCO1P5-201ENST00000433573 344 ntBASIC-1.3□□□□□ -2.62
VCANP13611 XACT-201ENST00000468762 497 ntTSL 5 BASIC-1.3□□□□□ -2.62
VCANP13611 AC113347.3-201ENST00000509113 148 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AC068205.3-201ENST00000636385 468 ntBASIC-1.3□□□□□ -2.62
VCANP13611 MIR548K-201ENST00000408406 116 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AL355994.1-201ENST00000424379 260 ntBASIC-1.3□□□□□ -2.62
VCANP13611 SNORA13-201ENST00000458790 133 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AC100830.2-201ENST00000581636 240 ntBASIC-1.3□□□□□ -2.62
VCANP13611 AL034555.1-201ENST00000604816 211 ntBASIC-1.3□□□□□ -2.62
VCANP13611 MIR148A-201ENST00000362215 68 ntBASIC-1.31□□□□□ -2.62
VCANP13611 AC011233.1-201ENST00000422812 283 ntBASIC-1.31□□□□□ -2.62
VCANP13611 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-1.31□□□□□ -2.62
VCANP13611 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.31□□□□□ -2.62
VCANP13611 PCNPP5-201ENST00000452246 481 ntBASIC-1.31□□□□□ -2.62
VCANP13611 AL441985.1-201ENST00000457727 251 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MTND4P33-201ENST00000556706 766 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MTND4P5-201ENST00000435821 1374 ntBASIC-1.31□□□□□ -2.62
VCANP13611 AC078974.1-201ENST00000411597 223 ntBASIC-1.31□□□□□ -2.62
VCANP13611 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-1.31□□□□□ -2.62
VCANP13611 AL031779.1-201ENST00000415663 330 ntBASIC-1.31□□□□□ -2.62
VCANP13611 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
VCANP13611 RNU6-727P-201ENST00000363592 107 ntBASIC-1.31□□□□□ -2.62
VCANP13611 RNU6-821P-201ENST00000390995 107 ntBASIC-1.31□□□□□ -2.62
VCANP13611 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-1.31□□□□□ -2.62
VCANP13611 MTND5P13-201ENST00000513046 1079 ntBASIC-1.31□□□□□ -2.62
VCANP13611 RNA5SP94-201ENST00000516917 108 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MIR3179-1-201ENST00000578940 84 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MIR3179-2-201ENST00000579107 84 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MIR3179-3-201ENST00000579566 84 ntBASIC-1.31□□□□□ -2.62
VCANP13611 MIR3179-4-201ENST00000617599 84 ntBASIC-1.31□□□□□ -2.62
VCANP13611 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-1.32□□□□□ -2.62
VCANP13611 BX322639.1-202ENST00000423987 2213 ntBASIC-1.32□□□□□ -2.62
VCANP13611 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.32□□□□□ -2.62
VCANP13611 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.32□□□□□ -2.62
VCANP13611 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-1.32□□□□□ -2.62
VCANP13611 AC090897.1-201ENST00000580909 226 ntBASIC-1.32□□□□□ -2.62
VCANP13611 AC144521.1-201ENST00000607148 956 ntBASIC-1.32□□□□□ -2.62
VCANP13611 AL356596.1-201ENST00000624230 379 ntBASIC-1.32□□□□□ -2.62
VCANP13611 RNU6-502P-201ENST00000362419 108 ntBASIC-1.32□□□□□ -2.62
VCANP13611 RNU6-652P-201ENST00000365488 107 ntBASIC-1.32□□□□□ -2.62
VCANP13611 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.32□□□□□ -2.62
VCANP13611 MIR1262-201ENST00000408276 93 ntBASIC-1.32□□□□□ -2.62
VCANP13611 MIR18B-201ENST00000454574 71 ntBASIC-1.32□□□□□ -2.62
VCANP13611 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-1.32□□□□□ -2.62
VCANP13611 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-1.32□□□□□ -2.62
VCANP13611 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.33□□□□□ -2.62
VCANP13611 AL031667.1-201ENST00000440222 725 ntBASIC-1.33□□□□□ -2.62
VCANP13611 MTND4LP26-201ENST00000518144 282 ntBASIC-1.33□□□□□ -2.62
VCANP13611 IL7-206ENST00000520269 456 ntTSL 3 BASIC-1.33□□□□□ -2.62
VCANP13611 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.33□□□□□ -2.62
VCANP13611 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.33□□□□□ -2.62
VCANP13611 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.33□□□□□ -2.62
VCANP13611 MIR517B-201ENST00000385102 67 ntBASIC-1.33□□□□□ -2.62
VCANP13611 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-1.33□□□□□ -2.62
VCANP13611 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-1.33□□□□□ -2.62
VCANP13611 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.33□□□□□ -2.62
VCANP13611 AC024581.2-201ENST00000619986 252 ntBASIC-1.33□□□□□ -2.62
VCANP13611 AC079354.2-201ENST00000453523 154 ntBASIC-1.33□□□□□ -2.62
VCANP13611 AC109446.1-201ENST00000566172 220 ntBASIC-1.33□□□□□ -2.62
VCANP13611 SEC63P2-201ENST00000503863 1939 ntBASIC-1.34□□□□□ -2.62
VCANP13611 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.34□□□□□ -2.62
VCANP13611 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-1.34□□□□□ -2.62
VCANP13611 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-1.34□□□□□ -2.62
VCANP13611 SUB1P2-201ENST00000556401 297 ntBASIC-1.34□□□□□ -2.62
VCANP13611 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.34□□□□□ -2.62
VCANP13611 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.34□□□□□ -2.62
VCANP13611 AC010655.3-201ENST00000478818 450 ntBASIC-1.34□□□□□ -2.62
VCANP13611 MTND1P3-201ENST00000484956 952 ntBASIC-1.34□□□□□ -2.62
VCANP13611 RNU6-1261P-201ENST00000517194 104 ntBASIC-1.34□□□□□ -2.62
VCANP13611 HMGB1P33-201ENST00000563485 527 ntBASIC-1.34□□□□□ -2.62
VCANP13611 RNA5SP405-201ENST00000363059 114 ntBASIC-1.34□□□□□ -2.62
VCANP13611 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-1.34□□□□□ -2.62
VCANP13611 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC-1.34□□□□□ -2.62
VCANP13611 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-1.34□□□□□ -2.62
VCANP13611 MIR548AO-201ENST00000579992 96 ntBASIC-1.34□□□□□ -2.62
VCANP13611 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.34□□□□□ -2.62
VCANP13611 AL589743.7-201ENST00000612637 233 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms