Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC112693.2-201ENST00000556538 232 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 POLR3GP2-201ENST00000588366 668 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORA72.2-201ENST00000365028 127 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORA12.1-201ENST00000390873 148 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC016831.2-201ENST00000417179 352 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 MTND1P30-201ENST00000441241 901 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.2□□□□□ -2.44
COL6A3P12111 VN1R10P-201ENST00000447106 875 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 ZNF886P-201ENST00000450781 723 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORD4A-201ENST00000459174 72 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AP000763.2-201ENST00000540641 163 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.2□□□□□ -2.44
COL6A3P12111 AC136475.10-201ENST00000620253 385 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 MIR3529-201ENST00000637713 78 ntBASIC-0.2□□□□□ -2.44
COL6A3P12111 SNORD114-19-201ENST00000363072 75 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU6-815P-201ENST00000384080 113 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AL034345.1-201ENST00000407768 123 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU2-23P-201ENST00000410545 195 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU4-46P-201ENST00000410818 138 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A3P12111 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A3P12111 MTND2P21-201ENST00000436242 1042 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 USP9YP22-201ENST00000438971 294 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AL606517.1-201ENST00000446914 387 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 NFU1P2-201ENST00000448700 469 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU7-56P-201ENST00000458744 62 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU6-333P-201ENST00000459117 107 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AC027288.2-201ENST00000553028 243 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AL451046.2-201ENST00000403074 277 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 LARP1BP3-201ENST00000437229 869 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AC079382.1-201ENST00000493346 557 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.21□□□□□ -2.44
COL6A3P12111 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A3P12111 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.21□□□□□ -2.44
COL6A3P12111 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.21□□□□□ -2.44
COL6A3P12111 MIR653-201ENST00000385279 96 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC123900.1-201ENST00000420390 96 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AL451054.2-201ENST00000420896 202 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 USP9YP14-201ENST00000430663 563 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A3P12111 RNU7-34P-201ENST00000459394 64 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A3P12111 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AC080078.2-201ENST00000603766 501 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AL158211.4-201ENST00000606988 584 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC011374.2-201ENST00000607135 526 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC034229.4-201ENST00000607861 441 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AL136317.1-201ENST00000612653 226 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 RNU6-743P-201ENST00000364151 106 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MIR593-201ENST00000384856 100 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MIR186-201ENST00000384988 86 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 SNORD83B-201ENST00000386745 93 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MIR196A1-201ENST00000388006 70 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AL133475.1-201ENST00000404414 305 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 RNU6-994P-201ENST00000410507 111 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL6A3P12111 STAG3L5P-204ENST00000443759 179 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MTND1P33-201ENST00000446251 917 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AC003071.1-201ENST00000451219 789 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 RPL39P39-201ENST00000455840 151 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AC008628.1-201ENST00000508663 265 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 MIR3136-201ENST00000583498 78 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.22□□□□□ -2.44
COL6A3P12111 BNIP3P24-201ENST00000593398 557 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.22□□□□□ -2.44
COL6A3P12111 AP001981.2-201ENST00000603241 418 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 AP000484.1-201ENST00000620067 1252 ntBASIC-0.22□□□□□ -2.44
COL6A3P12111 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 U8.5-201ENST00000364528 136 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 MIR892B-201ENST00000401279 77 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL6A3P12111 MTCO3P29-201ENST00000432119 779 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AC245047.8-201ENST00000456455 284 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AC013828.1-201ENST00000481845 158 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AC106038.2-201ENST00000520706 568 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AC134698.4-201ENST00000523451 826 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL6A3P12111 BNIP3P6-201ENST00000549284 499 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-0.22□□□□□ -2.45
COL6A3P12111 AC104695.3-201ENST00000604052 296 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 MIR6129-201ENST00000616087 109 ntBASIC-0.22□□□□□ -2.45
COL6A3P12111 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms