Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MTCO2P30-201ENST00000503662 364 ntBASIC1.91□□□□□ -2.1
KRT3P12035 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT3P12035 AC005741.1-201ENST00000511094 432 ntBASIC1.91□□□□□ -2.1
KRT3P12035 RNU6-566P-201ENST00000516790 107 ntBASIC1.91□□□□□ -2.1
KRT3P12035 SNORA59B-202ENST00000578183 701 ntBASIC1.91□□□□□ -2.1
KRT3P12035 AC018638.8-201ENST00000588755 281 ntBASIC1.91□□□□□ -2.1
KRT3P12035 AL022345.1-201ENST00000607292 135 ntBASIC1.91□□□□□ -2.1
KRT3P12035 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
KRT3P12035 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
KRT3P12035 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.91□□□□□ -2.1
KRT3P12035 CASC19-280ENST00000642102 1351 ntBASIC1.9□□□□□ -2.11
KRT3P12035 Y_RNA.505-201ENST00000384489 102 ntBASIC1.9□□□□□ -2.11
KRT3P12035 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
KRT3P12035 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.9□□□□□ -2.11
KRT3P12035 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.9□□□□□ -2.11
KRT3P12035 RNA5SP57-201ENST00000459463 123 ntBASIC1.9□□□□□ -2.11
KRT3P12035 AC087477.1-201ENST00000465747 340 ntBASIC1.9□□□□□ -2.11
KRT3P12035 RPS23P5-201ENST00000495419 428 ntBASIC1.9□□□□□ -2.11
KRT3P12035 RNA5SP454-201ENST00000517231 127 ntBASIC1.9□□□□□ -2.11
KRT3P12035 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
KRT3P12035 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
KRT3P12035 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
KRT3P12035 AC009318.2-201ENST00000610917 651 ntBASIC1.9□□□□□ -2.11
KRT3P12035 AC122108.2-201ENST00000611946 526 ntBASIC1.9□□□□□ -2.11
KRT3P12035 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
KRT3P12035 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
KRT3P12035 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.9□□□□□ -2.11
KRT3P12035 CBX3P1-201ENST00000325243 554 ntBASIC1.89□□□□□ -2.11
KRT3P12035 Y_RNA.248-201ENST00000364501 109 ntBASIC1.89□□□□□ -2.11
KRT3P12035 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
KRT3P12035 MIR29C-201ENST00000385231 88 ntBASIC1.89□□□□□ -2.11
KRT3P12035 SNORA40.19-201ENST00000390846 128 ntBASIC1.89□□□□□ -2.11
KRT3P12035 AL356776.1-201ENST00000406574 447 ntBASIC1.89□□□□□ -2.11
KRT3P12035 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
KRT3P12035 RPL30P16-201ENST00000419341 429 ntBASIC1.89□□□□□ -2.11
KRT3P12035 HMGN2P3-201ENST00000433603 273 ntBASIC1.89□□□□□ -2.11
KRT3P12035 HMGN2P5-201ENST00000436882 273 ntBASIC1.89□□□□□ -2.11
KRT3P12035 FTH1P25-201ENST00000447665 469 ntBASIC1.89□□□□□ -2.11
KRT3P12035 RNU6-358P-201ENST00000516564 75 ntBASIC1.89□□□□□ -2.11
KRT3P12035 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
KRT3P12035 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.89□□□□□ -2.11
KRT3P12035 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.89□□□□□ -2.11
KRT3P12035 AC005668.1-201ENST00000571142 476 ntBASIC1.89□□□□□ -2.11
KRT3P12035 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.89□□□□□ -2.11
KRT3P12035 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
KRT3P12035 MIR5006-201ENST00000583027 110 ntBASIC1.89□□□□□ -2.11
KRT3P12035 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.89□□□□□ -2.11
KRT3P12035 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
KRT3P12035 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.88□□□□□ -2.11
KRT3P12035 RNU6-23P-201ENST00000363283 107 ntBASIC1.88□□□□□ -2.11
KRT3P12035 Y_RNA.135-201ENST00000363439 95 ntBASIC1.88□□□□□ -2.11
KRT3P12035 Y_RNA.160-201ENST00000363677 92 ntBASIC1.88□□□□□ -2.11
KRT3P12035 RNU6-784P-201ENST00000384330 106 ntBASIC1.88□□□□□ -2.11
KRT3P12035 MIR32-201ENST00000384965 70 ntBASIC1.88□□□□□ -2.11
KRT3P12035 MIR487A-201ENST00000385009 80 ntBASIC1.88□□□□□ -2.11
KRT3P12035 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
KRT3P12035 SNORA40.18-201ENST00000391200 128 ntBASIC1.88□□□□□ -2.11
KRT3P12035 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.88□□□□□ -2.11
KRT3P12035 AL513124.1-201ENST00000450410 614 ntBASIC1.88□□□□□ -2.11
KRT3P12035 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.88□□□□□ -2.11
KRT3P12035 RPL23AP75-201ENST00000491601 451 ntBASIC1.88□□□□□ -2.11
KRT3P12035 AF186996.7-201ENST00000492781 209 ntBASIC1.88□□□□□ -2.11
KRT3P12035 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
KRT3P12035 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRT3P12035 ATP5EP1-201ENST00000510257 156 ntBASIC1.88□□□□□ -2.11
KRT3P12035 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.88□□□□□ -2.11
KRT3P12035 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.88□□□□□ -2.11
KRT3P12035 AC016727.2-201ENST00000603988 621 ntBASIC1.88□□□□□ -2.11
KRT3P12035 AC005858.4-201ENST00000623191 700 ntBASIC1.88□□□□□ -2.11
KRT3P12035 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KRT3P12035 Y_RNA.48-201ENST00000362710 103 ntBASIC1.87□□□□□ -2.11
KRT3P12035 RNU5B-2P-201ENST00000363036 113 ntBASIC1.87□□□□□ -2.11
KRT3P12035 RNU6-1059P-201ENST00000363752 98 ntBASIC1.87□□□□□ -2.11
KRT3P12035 Y_RNA.473-201ENST00000384333 102 ntBASIC1.87□□□□□ -2.11
KRT3P12035 MIR583-201ENST00000384846 75 ntBASIC1.87□□□□□ -2.11
KRT3P12035 AL445305.1-201ENST00000432577 575 ntBASIC1.87□□□□□ -2.11
KRT3P12035 DAP3P1-201ENST00000441522 278 ntBASIC1.87□□□□□ -2.11
KRT3P12035 AC004386.2-201ENST00000441858 148 ntBASIC1.87□□□□□ -2.11
KRT3P12035 RNU6-329P-201ENST00000459618 107 ntBASIC1.87□□□□□ -2.11
KRT3P12035 TOMM22P6-201ENST00000465035 409 ntBASIC1.87□□□□□ -2.11
KRT3P12035 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.87□□□□□ -2.11
KRT3P12035 MIR4742-201ENST00000581069 85 ntBASIC1.87□□□□□ -2.11
KRT3P12035 MIR3945-201ENST00000581853 98 ntBASIC1.87□□□□□ -2.11
KRT3P12035 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.87□□□□□ -2.11
KRT3P12035 AC060780.3-201ENST00000589464 80 ntBASIC1.87□□□□□ -2.11
KRT3P12035 7SK.7-201ENST00000603504 247 ntBASIC1.87□□□□□ -2.11
KRT3P12035 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.87□□□□□ -2.11
KRT3P12035 AL133216.2-202ENST00000634512 349 ntBASIC1.87□□□□□ -2.11
KRT3P12035 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRT3P12035 MTND5P9-201ENST00000503854 1755 ntBASIC1.86□□□□□ -2.11
KRT3P12035 RNU6-545P-201ENST00000362681 104 ntBASIC1.86□□□□□ -2.11
KRT3P12035 SNORD50.1-201ENST00000362987 71 ntBASIC1.86□□□□□ -2.11
KRT3P12035 Y_RNA.132-201ENST00000363421 102 ntBASIC1.86□□□□□ -2.11
KRT3P12035 Y_RNA.301-201ENST00000364990 103 ntBASIC1.86□□□□□ -2.11
KRT3P12035 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
KRT3P12035 MIR548F5-201ENST00000408421 86 ntBASIC1.86□□□□□ -2.11
KRT3P12035 AC244636.1-201ENST00000421152 228 ntBASIC1.86□□□□□ -2.11
KRT3P12035 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
KRT3P12035 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
KRT3P12035 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms