Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TPTE2P5-203ENST00000458118 728 ntBASIC1.07□□□□□ -2.24
CD28P10747 RNU6-261P-201ENST00000459506 102 ntBASIC1.07□□□□□ -2.24
CD28P10747 HMGN1P7-201ENST00000491722 313 ntBASIC1.07□□□□□ -2.24
CD28P10747 RPS23P5-201ENST00000495419 428 ntBASIC1.07□□□□□ -2.24
CD28P10747 AC025465.4-201ENST00000513422 638 ntBASIC1.07□□□□□ -2.24
CD28P10747 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.07□□□□□ -2.24
CD28P10747 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.07□□□□□ -2.24
CD28P10747 MIR4422-201ENST00000581938 83 ntBASIC1.07□□□□□ -2.24
CD28P10747 AC064836.2-201ENST00000609491 462 ntBASIC1.07□□□□□ -2.24
CD28P10747 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.07□□□□□ -2.24
CD28P10747 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CD28P10747 Y_RNA.296-201ENST00000364930 108 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU4-20P-201ENST00000365601 151 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU6-1286P-201ENST00000383871 107 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU6-360P-201ENST00000390944 104 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU1-78P-201ENST00000391248 165 ntBASIC1.06□□□□□ -2.24
CD28P10747 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
CD28P10747 DEFB108C-201ENST00000400154 252 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU4-55P-201ENST00000410731 137 ntBASIC1.06□□□□□ -2.24
CD28P10747 AL161935.2-201ENST00000414627 60 ntBASIC1.06□□□□□ -2.24
CD28P10747 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.06□□□□□ -2.24
CD28P10747 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.06□□□□□ -2.24
CD28P10747 USP9YP28-201ENST00000435142 589 ntBASIC1.06□□□□□ -2.24
CD28P10747 MTND1P26-201ENST00000440488 538 ntBASIC1.06□□□□□ -2.24
CD28P10747 AC245517.4-201ENST00000448601 281 ntBASIC1.06□□□□□ -2.24
CD28P10747 Y_RNA.654-201ENST00000497848 106 ntBASIC1.06□□□□□ -2.24
CD28P10747 RPL39P5-202ENST00000512505 151 ntBASIC1.06□□□□□ -2.24
CD28P10747 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.06□□□□□ -2.24
CD28P10747 RNU2-34P-201ENST00000516534 121 ntBASIC1.06□□□□□ -2.24
CD28P10747 RNU6-323P-201ENST00000521915 107 ntBASIC1.06□□□□□ -2.24
CD28P10747 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.06□□□□□ -2.24
CD28P10747 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.06□□□□□ -2.24
CD28P10747 CPDP1-201ENST00000579660 283 ntBASIC1.06□□□□□ -2.24
CD28P10747 MIR5692C1-201ENST00000585309 91 ntBASIC1.06□□□□□ -2.24
CD28P10747 AC069114.2-201ENST00000604699 304 ntBASIC1.06□□□□□ -2.24
CD28P10747 AC245008.1-201ENST00000608123 476 ntBASIC1.06□□□□□ -2.24
CD28P10747 MIR6078-201ENST00000611069 100 ntBASIC1.06□□□□□ -2.24
CD28P10747 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.06□□□□□ -2.24
CD28P10747 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.06□□□□□ -2.24
CD28P10747 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.06□□□□□ -2.24
CD28P10747 AC090582.1-201ENST00000636321 199 ntBASIC1.06□□□□□ -2.24
CD28P10747 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.06□□□□□ -2.24
CD28P10747 AC009541.1-201ENST00000438279 2662 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-1322P-201ENST00000364309 107 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
CD28P10747 Y_RNA.378-201ENST00000365652 113 ntBASIC1.05□□□□□ -2.24
CD28P10747 Y_RNA.381-201ENST00000365666 102 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
CD28P10747 SNORA29-201ENST00000384183 140 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-1119P-201ENST00000384349 108 ntBASIC1.05□□□□□ -2.24
CD28P10747 MIR520A-201ENST00000384862 85 ntBASIC1.05□□□□□ -2.24
CD28P10747 MIR300-201ENST00000401138 83 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-648P-201ENST00000410190 107 ntBASIC1.05□□□□□ -2.24
CD28P10747 AL663109.1-201ENST00000411498 844 ntBASIC1.05□□□□□ -2.24
CD28P10747 ARL5AP1-201ENST00000418991 388 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC007098.1-201ENST00000420122 367 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.05□□□□□ -2.24
CD28P10747 JTBP1-201ENST00000441314 247 ntBASIC1.05□□□□□ -2.24
CD28P10747 AL359672.1-201ENST00000442302 409 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC007215.1-201ENST00000464893 276 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-835P-201ENST00000516974 104 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNA5SP437-201ENST00000517249 129 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC026470.2-201ENST00000561492 181 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC100830.2-201ENST00000581636 240 ntBASIC1.05□□□□□ -2.24
CD28P10747 AC092747.3-201ENST00000603769 301 ntBASIC1.05□□□□□ -2.24
CD28P10747 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CD28P10747 AC139792.3-201ENST00000623525 224 ntBASIC1.05□□□□□ -2.24
CD28P10747 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.05□□□□□ -2.24
CD28P10747 AL159152.1-201ENST00000635019 2587 ntBASIC1.05□□□□□ -2.24
CD28P10747 RNU6-1019P-201ENST00000364424 107 ntBASIC1.04□□□□□ -2.24
CD28P10747 Y_RNA.269-201ENST00000364685 89 ntBASIC1.04□□□□□ -2.24
CD28P10747 Y_RNA.359-201ENST00000365498 102 ntBASIC1.04□□□□□ -2.24
CD28P10747 SNORA18.2-201ENST00000383865 132 ntBASIC1.04□□□□□ -2.24
CD28P10747 Y_RNA.481-201ENST00000384373 102 ntBASIC1.04□□□□□ -2.24
CD28P10747 RNU6-1026P-201ENST00000384465 108 ntBASIC1.04□□□□□ -2.24
CD28P10747 RNY3P9-201ENST00000384727 106 ntBASIC1.04□□□□□ -2.24
CD28P10747 RNU6-1093P-201ENST00000391194 107 ntBASIC1.04□□□□□ -2.24
CD28P10747 MIR1283-1-201ENST00000408494 87 ntBASIC1.04□□□□□ -2.24
CD28P10747 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
CD28P10747 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.04□□□□□ -2.24
CD28P10747 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.04□□□□□ -2.24
CD28P10747 RPL21P111-201ENST00000418453 477 ntBASIC1.04□□□□□ -2.24
CD28P10747 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.04□□□□□ -2.24
CD28P10747 MTCO2P16-201ENST00000436962 677 ntBASIC1.04□□□□□ -2.24
CD28P10747 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.04□□□□□ -2.24
CD28P10747 snoU13.9-201ENST00000458927 103 ntBASIC1.04□□□□□ -2.24
CD28P10747 RNU1-123P-201ENST00000458950 160 ntBASIC1.04□□□□□ -2.24
CD28P10747 U8.21-201ENST00000459536 136 ntBASIC1.04□□□□□ -2.24
CD28P10747 RNU6-1208P-201ENST00000459588 107 ntBASIC1.04□□□□□ -2.24
CD28P10747 HMGN2P9-201ENST00000476875 229 ntBASIC1.04□□□□□ -2.24
CD28P10747 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.04□□□□□ -2.24
CD28P10747 AL157687.1-201ENST00000554853 619 ntBASIC1.04□□□□□ -2.24
CD28P10747 AL160236.1-201ENST00000556317 195 ntBASIC1.04□□□□□ -2.24
CD28P10747 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.04□□□□□ -2.24
CD28P10747 AC006362.1-201ENST00000567392 174 ntBASIC1.04□□□□□ -2.24
CD28P10747 FGF7P1-201ENST00000582820 288 ntBASIC1.04□□□□□ -2.24
CD28P10747 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.04□□□□□ -2.24
CD28P10747 AC083806.3-201ENST00000614016 455 ntBASIC1.04□□□□□ -2.24
CD28P10747 FAM157A-202ENST00000615155 405 ntBASIC1.04□□□□□ -2.24
CD28P10747 AC005562.2-201ENST00000618264 111 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms