Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-1090P-201ENST00000364065 94 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.256-201ENST00000364594 104 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-877P-201ENST00000383868 107 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-790P-201ENST00000384479 105 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 MIR1261-201ENST00000408659 82 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AC004386.2-201ENST00000441858 148 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RNU7-187P-201ENST00000458985 68 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 snoU13.15-201ENST00000459407 104 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RN7SL429P-201ENST00000479090 223 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RN7SL489P-201ENST00000486185 223 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RN7SL327P-201ENST00000488659 223 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AF186996.7-201ENST00000492781 209 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 AL133215.3-201ENST00000609801 448 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 RN7SL853P-201ENST00000617250 223 ntBASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.3□□□□□ -2.2
IGHV3-43DP0DP04 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-439P-201ENST00000384188 106 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-784P-201ENST00000384330 106 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MIR549A-201ENST00000385268 96 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MIR300-201ENST00000401138 83 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MIR1283-1-201ENST00000408494 87 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 RPL21P111-201ENST00000418453 477 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AL358453.1-201ENST00000422522 250 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MTND3P21-201ENST00000433774 331 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MTCO2P7-201ENST00000446518 666 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 ATP5J2P3-201ENST00000451550 258 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 OR2AQ1P-201ENST00000451972 200 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 HMGN2P23-201ENST00000456759 269 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 snoU13.26-201ENST00000459452 105 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 TRBVA-201ENST00000498804 316 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 SNORA44.1-201ENST00000517031 108 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MTND1P35-201ENST00000526739 508 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 SNORA59B-202ENST00000578183 701 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MIR4753-201ENST00000585119 83 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AC010928.2-201ENST00000588017 287 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AP000907.4-201ENST00000604143 237 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AC012557.2-201ENST00000605919 418 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 TCL6_2.1-201ENST00000615162 119 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 AL359697.1-201ENST00000624879 587 ntBASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
IGHV3-43DP0DP04 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-112P-201ENST00000363599 104 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-418P-201ENST00000384035 107 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 Y_RNA.530-201ENST00000384587 101 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 MIR30A-201ENST00000385092 71 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 MIR1304-201ENST00000408243 91 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AL353572.1-201ENST00000442490 417 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC010095.1-201ENST00000443543 144 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AL357134.1-201ENST00000445848 426 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC087477.1-201ENST00000465747 340 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC008834.1-201ENST00000511612 175 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC109635.3-201ENST00000529536 185 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC016957.1-201ENST00000534895 309 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AC069114.2-201ENST00000604699 304 ntBASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
IGHV3-43DP0DP04 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 Y_RNA.151-201ENST00000363566 112 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 RNA5SP190-201ENST00000365222 118 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-95P-201ENST00000384697 107 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 MIR181A1-201ENST00000385026 110 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 RNU6-332P-201ENST00000391193 108 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 MTCO1P21-201ENST00000416634 589 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 RPL31P63-201ENST00000422565 375 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 Z82205.1-201ENST00000428456 297 ntBASIC1.27□□□□□ -2.21
IGHV3-43DP0DP04 MTCO3P8-201ENST00000453691 755 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms