Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 Y_RNA.693-201ENST00000516641 110 ntBASIC1.22□□□□□ -2.21
CD74P04233 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.22□□□□□ -2.21
CD74P04233 AL157687.1-201ENST00000554853 619 ntBASIC1.22□□□□□ -2.21
CD74P04233 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
CD74P04233 AC048344.4-201ENST00000619744 527 ntBASIC1.22□□□□□ -2.21
CD74P04233 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CD74P04233 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.22□□□□□ -2.21
CD74P04233 OR4G1P-203ENST00000641984 1631 ntBASIC1.22□□□□□ -2.21
CD74P04233 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CD74P04233 RNU6-1252P-201ENST00000363054 104 ntBASIC1.21□□□□□ -2.22
CD74P04233 Y_RNA.231-201ENST00000364358 102 ntBASIC1.21□□□□□ -2.22
CD74P04233 SNORA18.2-201ENST00000383865 132 ntBASIC1.21□□□□□ -2.22
CD74P04233 Y_RNA.517-201ENST00000384551 106 ntBASIC1.21□□□□□ -2.22
CD74P04233 MIR521-1-201ENST00000384902 87 ntBASIC1.21□□□□□ -2.22
CD74P04233 MIR549A-201ENST00000385268 96 ntBASIC1.21□□□□□ -2.22
CD74P04233 EIF4E2P1-201ENST00000393781 255 ntBASIC1.21□□□□□ -2.22
CD74P04233 MIR450B-201ENST00000401182 78 ntBASIC1.21□□□□□ -2.22
CD74P04233 RPL30P13-201ENST00000418873 348 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC016907.1-201ENST00000419483 435 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC123900.1-201ENST00000420390 96 ntBASIC1.21□□□□□ -2.22
CD74P04233 AL359672.1-201ENST00000442302 409 ntBASIC1.21□□□□□ -2.22
CD74P04233 Z83846.1-201ENST00000446798 265 ntBASIC1.21□□□□□ -2.22
CD74P04233 snoU13.9-201ENST00000458927 103 ntBASIC1.21□□□□□ -2.22
CD74P04233 U8.21-201ENST00000459536 136 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC091885.1-201ENST00000506658 268 ntBASIC1.21□□□□□ -2.22
CD74P04233 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.21□□□□□ -2.22
CD74P04233 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.21□□□□□ -2.22
CD74P04233 MRPS36P4-201ENST00000534436 298 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC024909.2-201ENST00000553035 286 ntBASIC1.21□□□□□ -2.22
CD74P04233 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.21□□□□□ -2.22
CD74P04233 AC245505.1-201ENST00000556398 224 ntBASIC1.21□□□□□ -2.22
CD74P04233 SUB1P3-201ENST00000564581 315 ntBASIC1.21□□□□□ -2.22
CD74P04233 MIR4498-201ENST00000577599 66 ntBASIC1.21□□□□□ -2.22
CD74P04233 SNORA59B-202ENST00000578183 701 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC010525.2-201ENST00000590920 195 ntBASIC1.21□□□□□ -2.22
CD74P04233 RNU6-89P-201ENST00000606519 100 ntBASIC1.21□□□□□ -2.22
CD74P04233 AC092954.2-201ENST00000609103 430 ntBASIC1.21□□□□□ -2.22
CD74P04233 MIR8081-201ENST00000611533 95 ntBASIC1.21□□□□□ -2.22
CD74P04233 RMST_3.1-201ENST00000611651 109 ntBASIC1.21□□□□□ -2.22
CD74P04233 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.21□□□□□ -2.22
CD74P04233 Y_RNA.194-201ENST00000363985 102 ntBASIC1.2□□□□□ -2.22
CD74P04233 Y_RNA.338-201ENST00000365320 114 ntBASIC1.2□□□□□ -2.22
CD74P04233 RNU6-214P-201ENST00000384130 107 ntBASIC1.2□□□□□ -2.22
CD74P04233 SNORA29-201ENST00000384183 140 ntBASIC1.2□□□□□ -2.22
CD74P04233 MIR514A2-201ENST00000385131 88 ntBASIC1.2□□□□□ -2.22
CD74P04233 MIR514A3-201ENST00000385132 88 ntBASIC1.2□□□□□ -2.22
CD74P04233 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
CD74P04233 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CD74P04233 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CD74P04233 MIR1323-201ENST00000408090 73 ntBASIC1.2□□□□□ -2.22
CD74P04233 RNU6-325P-201ENST00000411132 105 ntBASIC1.2□□□□□ -2.22
CD74P04233 ARL5AP1-201ENST00000418991 388 ntBASIC1.2□□□□□ -2.22
CD74P04233 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.2□□□□□ -2.22
CD74P04233 SEPT14P3-201ENST00000439401 183 ntBASIC1.2□□□□□ -2.22
CD74P04233 MTCO1P44-201ENST00000441935 243 ntBASIC1.2□□□□□ -2.22
CD74P04233 AL732372.2-207ENST00000445840 183 ntBASIC1.2□□□□□ -2.22
CD74P04233 MTATP6P26-201ENST00000445926 662 ntBASIC1.2□□□□□ -2.22
CD74P04233 SEPT14P2-201ENST00000453405 183 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.2□□□□□ -2.22
CD74P04233 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.2□□□□□ -2.22
CD74P04233 AC007547.1-201ENST00000462177 490 ntBASIC1.2□□□□□ -2.22
CD74P04233 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.2□□□□□ -2.22
CD74P04233 RPS23P5-201ENST00000495419 428 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC019235.1-201ENST00000503847 207 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC091435.1-201ENST00000505442 584 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
CD74P04233 SEPT14P4-201ENST00000513445 186 ntBASIC1.2□□□□□ -2.22
CD74P04233 RNU6-314P-201ENST00000516574 104 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.2□□□□□ -2.22
CD74P04233 FO082796.1-201ENST00000523795 183 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.2□□□□□ -2.22
CD74P04233 AC008269.2-201ENST00000561915 1105 ntBASIC1.2□□□□□ -2.22
CD74P04233 MIR5094-201ENST00000578766 85 ntBASIC1.2□□□□□ -2.22
CD74P04233 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.2□□□□□ -2.22
CD74P04233 AC146944.4-201ENST00000602697 718 ntBASIC1.2□□□□□ -2.22
CD74P04233 AC009994.1-201ENST00000606889 253 ntBASIC1.2□□□□□ -2.22
CD74P04233 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.2□□□□□ -2.22
CD74P04233 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.2□□□□□ -2.22
CD74P04233 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CD74P04233 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
CD74P04233 Y_RNA.41-201ENST00000362646 102 ntBASIC1.19□□□□□ -2.22
CD74P04233 RNU6-545P-201ENST00000362681 104 ntBASIC1.19□□□□□ -2.22
CD74P04233 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
CD74P04233 Y_RNA.167-201ENST00000363735 109 ntBASIC1.19□□□□□ -2.22
CD74P04233 RNU6-457P-201ENST00000363999 107 ntBASIC1.19□□□□□ -2.22
CD74P04233 SNORD31B-201ENST00000364977 69 ntBASIC1.19□□□□□ -2.22
CD74P04233 MIR150-201ENST00000385048 84 ntBASIC1.19□□□□□ -2.22
CD74P04233 Y_RNA.595-201ENST00000410403 105 ntBASIC1.19□□□□□ -2.22
CD74P04233 RNA5SP494-201ENST00000410653 129 ntBASIC1.19□□□□□ -2.22
CD74P04233 Y_RNA.615-201ENST00000410769 117 ntBASIC1.19□□□□□ -2.22
CD74P04233 RNA5SP100-201ENST00000410903 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 RNA5SP59-201ENST00000410922 110 ntBASIC1.19□□□□□ -2.22
CD74P04233 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 ERLEC1P1-201ENST00000433806 578 ntBASIC1.19□□□□□ -2.22
CD74P04233 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 MTND1P1-201ENST00000445453 368 ntBASIC1.19□□□□□ -2.22
CD74P04233 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.19□□□□□ -2.22
CD74P04233 RN7SKP210-201ENST00000459176 261 ntBASIC1.19□□□□□ -2.22
CD74P04233 AC108729.3-201ENST00000513484 108 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms