Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
MT-ND1P03886 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
MT-ND1P03886 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.58-201ENST00000362807 102 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.154-201ENST00000363624 102 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNU6-1188P-201ENST00000363795 107 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNY3P1-201ENST00000365085 102 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNY3-201ENST00000365484 102 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.490-201ENST00000384413 102 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 SNORD116-29-201ENST00000384516 83 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.597-201ENST00000410463 100 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 NCOR1P3-201ENST00000420479 303 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AC243428.1-201ENST00000421099 264 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 EIF4EP2-201ENST00000422816 654 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AC012306.1-201ENST00000423267 114 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AL356320.1-201ENST00000429616 163 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AL513124.1-201ENST00000450410 614 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.635-201ENST00000459041 101 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNU6-120P-201ENST00000516077 103 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNU6-559P-201ENST00000516151 98 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 Y_RNA.708-201ENST00000516950 96 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.87□□□□□ -2.11
MT-ND1P03886 AC018630.3-201ENST00000542637 96 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AC008749.1-201ENST00000597650 306 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AL669831.3-213ENST00000636676 183 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.87□□□□□ -2.11
MT-ND1P03886 MTND5P9-201ENST00000503854 1755 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 AC233981.2-201ENST00000611524 1614 ntBASIC1.87□□□□□ -2.11
MT-ND1P03886 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.86□□□□□ -2.11
MT-ND1P03886 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MT-ND1P03886 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
MT-ND1P03886 Y_RNA.2-201ENST00000362330 96 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 RNU4-73P-201ENST00000363164 141 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 SNORD32B-201ENST00000364460 84 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MIR549A-201ENST00000385268 96 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 AL023284.1-201ENST00000403956 276 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MTCYBP2-201ENST00000407745 171 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 Y_RNA.646-201ENST00000410980 101 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 RNU2-41P-201ENST00000410991 178 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 AL358453.1-201ENST00000422522 250 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MTCO3P10-201ENST00000455912 772 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
MT-ND1P03886 AC016256.1-201ENST00000547971 354 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 CYP4A27P-201ENST00000567218 190 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MIR3923-201ENST00000579521 83 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 MIR4273-201ENST00000582824 84 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
MT-ND1P03886 AC005014.2-201ENST00000607795 599 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 PCGEM1.1-201ENST00000613431 131 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 AL132822.1-201ENST00000617063 513 ntBASIC1.86□□□□□ -2.11
MT-ND1P03886 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
MT-ND1P03886 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MT-ND1P03886 Y_RNA.67-201ENST00000362870 100 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 XGY1-201ENST00000381172 446 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 Y_RNA.387-201ENST00000383918 102 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 RNU6-310P-201ENST00000384655 107 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND1P03886 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND1P03886 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND1P03886 AL353705.4-201ENST00000449661 238 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 Y_RNA.632-201ENST00000459189 102 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AC087477.1-201ENST00000465747 340 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 MTND3P22-201ENST00000510932 243 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 SCARNA16.2-201ENST00000516520 172 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 RNU6-965P-201ENST00000516721 96 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AP002770.2-201ENST00000543613 532 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND1P03886 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 MIR4795-201ENST00000584182 89 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
MT-ND1P03886 C8orf59P2-201ENST00000603441 271 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AC005520.5-201ENST00000613926 164 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
MT-ND1P03886 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
MT-ND1P03886 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MT-ND1P03886 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 SNORD115-3-201ENST00000363100 82 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RNU6-595P-201ENST00000363944 107 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 U8.10-201ENST00000384260 133 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 MIR676-201ENST00000390702 67 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RNA5SP494-201ENST00000410653 129 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 RN7SKP284-201ENST00000411002 343 ntBASIC1.84□□□□□ -2.11
MT-ND1P03886 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms