Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.3□□□□□ -2.46
TNFP01375 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.3□□□□□ -2.46
TNFP01375 RBBP4P6-201ENST00000508098 202 ntBASIC-0.3□□□□□ -2.46
TNFP01375 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
TNFP01375 IGLVI-20-201ENST00000519296 130 ntBASIC-0.3□□□□□ -2.46
TNFP01375 AC010376.1-201ENST00000522101 334 ntBASIC-0.3□□□□□ -2.46
TNFP01375 ZNF321P-202ENST00000550843 495 ntBASIC-0.3□□□□□ -2.46
TNFP01375 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.3□□□□□ -2.46
TNFP01375 AC022893.3-201ENST00000607665 437 ntBASIC-0.3□□□□□ -2.46
TNFP01375 SEPT14P17-201ENST00000617978 177 ntBASIC-0.3□□□□□ -2.46
TNFP01375 U6.108-201ENST00000637764 58 ntBASIC-0.3□□□□□ -2.46
TNFP01375 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
TNFP01375 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.31□□□□□ -2.46
TNFP01375 RNU6-161P-201ENST00000363051 106 ntBASIC-0.31□□□□□ -2.46
TNFP01375 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.31□□□□□ -2.46
TNFP01375 SNORD118-201ENST00000363593 134 ntBASIC-0.31□□□□□ -2.46
TNFP01375 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.31□□□□□ -2.46
TNFP01375 SNORA1.1-201ENST00000364671 133 ntBASIC-0.31□□□□□ -2.46
TNFP01375 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.31□□□□□ -2.46
TNFP01375 MIR10A-201ENST00000385043 110 ntBASIC-0.31□□□□□ -2.46
TNFP01375 SNORA40.8-201ENST00000411034 126 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AL663109.1-201ENST00000411498 844 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.31□□□□□ -2.46
TNFP01375 MTCYBP39-201ENST00000437562 491 ntBASIC-0.31□□□□□ -2.46
TNFP01375 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC007547.1-201ENST00000462177 490 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC108729.2-201ENST00000476543 840 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AL163973.1-201ENST00000484753 577 ntBASIC-0.31□□□□□ -2.46
TNFP01375 SUMO2P5-201ENST00000506790 245 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC113347.3-201ENST00000509113 148 ntBASIC-0.31□□□□□ -2.46
TNFP01375 MTND3P5-201ENST00000512798 333 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.31□□□□□ -2.46
TNFP01375 AC112693.2-201ENST00000556538 232 ntBASIC-0.31□□□□□ -2.46
TNFP01375 TMF1P1-201ENST00000576058 373 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.31□□□□□ -2.46
TNFP01375 AL606834.3-201ENST00000602615 496 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC112187.2-201ENST00000604345 283 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AC011921.3-201ENST00000605540 361 ntBASIC-0.31□□□□□ -2.46
TNFP01375 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.31□□□□□ -2.46
TNFP01375 AP000484.1-201ENST00000620067 1252 ntBASIC-0.31□□□□□ -2.46
TNFP01375 MIR8054-201ENST00000620877 86 ntBASIC-0.31□□□□□ -2.46
TNFP01375 AL157770.1-201ENST00000623049 439 ntBASIC-0.31□□□□□ -2.46
TNFP01375 MTND5P33-201ENST00000571250 1450 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RNU1-76P-201ENST00000362903 159 ntBASIC-0.32□□□□□ -2.46
TNFP01375 SNORA18.1-201ENST00000363418 128 ntBASIC-0.32□□□□□ -2.46
TNFP01375 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RNU6-384P-201ENST00000364900 104 ntBASIC-0.32□□□□□ -2.46
TNFP01375 MIR1305-201ENST00000408300 86 ntBASIC-0.32□□□□□ -2.46
TNFP01375 SNORD75.1-201ENST00000408373 60 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AC092809.3-201ENST00000415453 231 ntBASIC-0.32□□□□□ -2.46
TNFP01375 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.32□□□□□ -2.46
TNFP01375 AL590623.1-201ENST00000427864 105 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RPL17P35-201ENST00000432217 549 ntBASIC-0.32□□□□□ -2.46
TNFP01375 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.32□□□□□ -2.46
TNFP01375 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.32□□□□□ -2.46
TNFP01375 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.32□□□□□ -2.46
TNFP01375 AC091021.1-201ENST00000468051 388 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AC026414.1-201ENST00000504046 698 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AC116347.2-201ENST00000514912 523 ntBASIC-0.32□□□□□ -2.46
TNFP01375 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RNU4-49P-201ENST00000516080 140 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.32□□□□□ -2.46
TNFP01375 AC122134.1-202ENST00000569111 1201 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AL138889.2-201ENST00000603883 242 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AL022154.1-201ENST00000604698 785 ntBASIC-0.32□□□□□ -2.46
TNFP01375 AC015726.2-201ENST00000620112 122 ntBASIC-0.32□□□□□ -2.46
TNFP01375 RMST_7.1-201ENST00000621935 268 ntBASIC-0.32□□□□□ -2.46
TNFP01375 SNORD98-201ENST00000636377 67 ntBASIC-0.32□□□□□ -2.46
TNFP01375 MTND4P12-201ENST00000498999 1377 ntBASIC-0.32□□□□□ -2.46
TNFP01375 MTND5P32-201ENST00000560711 1802 ntBASIC-0.33□□□□□ -2.46
TNFP01375 MIR412-201ENST00000362142 91 ntBASIC-0.33□□□□□ -2.46
TNFP01375 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
TNFP01375 RNU6-142P-201ENST00000384019 107 ntBASIC-0.33□□□□□ -2.46
TNFP01375 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.33□□□□□ -2.46
TNFP01375 MIR1185-1-201ENST00000408598 86 ntBASIC-0.33□□□□□ -2.46
TNFP01375 RNU4-46P-201ENST00000410818 138 ntBASIC-0.33□□□□□ -2.46
TNFP01375 RNU6-57P-201ENST00000411348 103 ntBASIC-0.33□□□□□ -2.46
TNFP01375 MTND4LP11-201ENST00000422184 280 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AC007283.2-201ENST00000424739 197 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.33□□□□□ -2.46
TNFP01375 LINC01399-202ENST00000458450 244 ntBASIC-0.33□□□□□ -2.46
TNFP01375 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.33□□□□□ -2.46
TNFP01375 AC022447.4-201ENST00000504053 364 ntBASIC-0.33□□□□□ -2.46
TNFP01375 SNORA25.12-201ENST00000516202 82 ntBASIC-0.33□□□□□ -2.46
TNFP01375 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AF235103.2-201ENST00000525753 346 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AL158211.1-201ENST00000566763 763 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AC068790.2-201ENST00000602601 557 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AC100814.1-201ENST00000606963 623 ntBASIC-0.33□□□□□ -2.46
TNFP01375 MIR15A-201ENST00000607334 83 ntBASIC-0.33□□□□□ -2.46
TNFP01375 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.33□□□□□ -2.46
TNFP01375 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.33□□□□□ -2.46
TNFP01375 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.34□□□□□ -2.46
TNFP01375 RNU6-674P-201ENST00000363831 107 ntBASIC-0.34□□□□□ -2.46
TNFP01375 SNORA2.2-201ENST00000365473 135 ntBASIC-0.34□□□□□ -2.46
TNFP01375 SMIM11P1-201ENST00000369586 178 ntBASIC-0.34□□□□□ -2.46
TNFP01375 MIR544A-201ENST00000384855 91 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms