Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 RNU6-1286P-201ENST00000383871 107 ntBASIC1.72□□□□□ -2.13
SDC3O75056 RNU6-160P-201ENST00000384591 107 ntBASIC1.72□□□□□ -2.13
SDC3O75056 Y_RNA.573-201ENST00000384763 105 ntBASIC1.72□□□□□ -2.13
SDC3O75056 RNA5SP118-201ENST00000410385 109 ntBASIC1.72□□□□□ -2.13
SDC3O75056 RPS26P42-201ENST00000413485 326 ntBASIC1.72□□□□□ -2.13
SDC3O75056 VN1R36P-201ENST00000414936 291 ntBASIC1.72□□□□□ -2.13
SDC3O75056 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
SDC3O75056 AC096745.1-201ENST00000509945 370 ntBASIC1.72□□□□□ -2.13
SDC3O75056 RNA5SP490-201ENST00000517141 136 ntBASIC1.72□□□□□ -2.13
SDC3O75056 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.72□□□□□ -2.13
SDC3O75056 FGF7P1-201ENST00000582820 288 ntBASIC1.72□□□□□ -2.13
SDC3O75056 AL133215.3-201ENST00000609801 448 ntBASIC1.72□□□□□ -2.13
SDC3O75056 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC3O75056 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC3O75056 AC068137.4-201ENST00000638485 296 ntBASIC1.72□□□□□ -2.13
SDC3O75056 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC3O75056 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDC3O75056 RNU1-76P-201ENST00000362903 159 ntBASIC1.71□□□□□ -2.14
SDC3O75056 Y_RNA.135-201ENST00000363439 95 ntBASIC1.71□□□□□ -2.14
SDC3O75056 RNU6-534P-201ENST00000364877 106 ntBASIC1.71□□□□□ -2.14
SDC3O75056 SNORA29-201ENST00000384183 140 ntBASIC1.71□□□□□ -2.14
SDC3O75056 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
SDC3O75056 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
SDC3O75056 AL358453.1-201ENST00000422522 250 ntBASIC1.71□□□□□ -2.14
SDC3O75056 EIF4EP2-201ENST00000422816 654 ntBASIC1.71□□□□□ -2.14
SDC3O75056 RPS29P25-201ENST00000481709 171 ntBASIC1.71□□□□□ -2.14
SDC3O75056 AC107393.1-201ENST00000512403 346 ntBASIC1.71□□□□□ -2.14
SDC3O75056 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.71□□□□□ -2.14
SDC3O75056 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SDC3O75056 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC3O75056 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
SDC3O75056 MIR4781-201ENST00000585250 76 ntBASIC1.71□□□□□ -2.14
SDC3O75056 MIR502-201ENST00000606349 86 ntBASIC1.71□□□□□ -2.14
SDC3O75056 AL138726.1-201ENST00000614873 333 ntBASIC1.71□□□□□ -2.14
SDC3O75056 AC090517.2-201ENST00000614966 680 ntBASIC1.71□□□□□ -2.14
SDC3O75056 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDC3O75056 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SDC3O75056 Y_RNA.6-201ENST00000362350 114 ntBASIC1.7□□□□□ -2.14
SDC3O75056 RNU4-12P-201ENST00000365233 139 ntBASIC1.7□□□□□ -2.14
SDC3O75056 RNU2-41P-201ENST00000410991 178 ntBASIC1.7□□□□□ -2.14
SDC3O75056 C8orf59P1-201ENST00000429930 303 ntBASIC1.7□□□□□ -2.14
SDC3O75056 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SDC3O75056 MTCO3P18-201ENST00000440206 761 ntBASIC1.7□□□□□ -2.14
SDC3O75056 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.7□□□□□ -2.14
SDC3O75056 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.7□□□□□ -2.14
SDC3O75056 MIR3688-2-201ENST00000636963 87 ntBASIC1.7□□□□□ -2.14
SDC3O75056 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.7□□□□□ -2.14
SDC3O75056 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.7□□□□□ -2.14
SDC3O75056 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SDC3O75056 Y_RNA.123-201ENST00000363338 102 ntBASIC1.69□□□□□ -2.14
SDC3O75056 Y_RNA.212-201ENST00000364177 102 ntBASIC1.69□□□□□ -2.14
SDC3O75056 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SDC3O75056 RNU6-877P-201ENST00000383868 107 ntBASIC1.69□□□□□ -2.14
SDC3O75056 Y_RNA.414-201ENST00000384011 101 ntBASIC1.69□□□□□ -2.14
SDC3O75056 RNU6-933P-201ENST00000384424 107 ntBASIC1.69□□□□□ -2.14
SDC3O75056 AC123900.1-201ENST00000420390 96 ntBASIC1.69□□□□□ -2.14
SDC3O75056 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.69□□□□□ -2.14
SDC3O75056 RNU1-131P-201ENST00000458943 161 ntBASIC1.69□□□□□ -2.14
SDC3O75056 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SDC3O75056 ATP5EP1-201ENST00000510257 156 ntBASIC1.69□□□□□ -2.14
SDC3O75056 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
SDC3O75056 RNU6-256P-201ENST00000516747 97 ntBASIC1.69□□□□□ -2.14
SDC3O75056 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
SDC3O75056 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SDC3O75056 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.69□□□□□ -2.14
SDC3O75056 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SDC3O75056 Y_RNA.157-201ENST00000363638 102 ntBASIC1.68□□□□□ -2.14
SDC3O75056 RNA5SP493-201ENST00000364115 91 ntBASIC1.68□□□□□ -2.14
SDC3O75056 SNORD31B-201ENST00000364977 69 ntBASIC1.68□□□□□ -2.14
SDC3O75056 RNU6-968P-201ENST00000384076 107 ntBASIC1.68□□□□□ -2.14
SDC3O75056 RNU6-95P-201ENST00000384697 107 ntBASIC1.68□□□□□ -2.14
SDC3O75056 MIR521-1-201ENST00000384902 87 ntBASIC1.68□□□□□ -2.14
SDC3O75056 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
SDC3O75056 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
SDC3O75056 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.68□□□□□ -2.14
SDC3O75056 AL035666.1-201ENST00000446195 348 ntBASIC1.68□□□□□ -2.14
SDC3O75056 MTND1P11-201ENST00000456661 876 ntBASIC1.68□□□□□ -2.14
SDC3O75056 RNU7-187P-201ENST00000458985 68 ntBASIC1.68□□□□□ -2.14
SDC3O75056 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.68□□□□□ -2.14
SDC3O75056 RNU6-1098P-201ENST00000516772 96 ntBASIC1.68□□□□□ -2.14
SDC3O75056 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.68□□□□□ -2.14
SDC3O75056 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.68□□□□□ -2.14
SDC3O75056 MIR3672-201ENST00000584290 82 ntBASIC1.68□□□□□ -2.14
SDC3O75056 RMST_6.1-201ENST00000611980 203 ntBASIC1.68□□□□□ -2.14
SDC3O75056 AL590240.4-201ENST00000616908 390 ntBASIC1.68□□□□□ -2.14
SDC3O75056 AC139792.2-201ENST00000624218 587 ntBASIC1.68□□□□□ -2.14
SDC3O75056 LINC02555-201ENST00000563933 1951 ntBASIC1.68□□□□□ -2.14
SDC3O75056 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SDC3O75056 RNU6-562P-201ENST00000362731 107 ntBASIC1.67□□□□□ -2.14
SDC3O75056 RNU6-1252P-201ENST00000363054 104 ntBASIC1.67□□□□□ -2.14
SDC3O75056 Y_RNA.295-201ENST00000364918 102 ntBASIC1.67□□□□□ -2.14
SDC3O75056 SNORA32.2-201ENST00000384049 122 ntBASIC1.67□□□□□ -2.14
SDC3O75056 RNU6-1093P-201ENST00000391194 107 ntBASIC1.67□□□□□ -2.14
SDC3O75056 RNA5SP494-201ENST00000410653 129 ntBASIC1.67□□□□□ -2.14
SDC3O75056 Z82205.1-201ENST00000428456 297 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms