Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 RNU2-19P-201ENST00000517288 84 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.95□□□□□ -2.1
SNX3O60493 CBX3P8-201ENST00000532412 525 ntBASIC1.95□□□□□ -2.1
SNX3O60493 RPL17P51-201ENST00000605218 238 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX3O60493 AC009229.3-201ENST00000608056 282 ntBASIC1.95□□□□□ -2.1
SNX3O60493 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC005562.2-201ENST00000618264 111 ntBASIC1.95□□□□□ -2.1
SNX3O60493 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX3O60493 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SNX3O60493 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SNX3O60493 ZNF299P-201ENST00000406845 1804 ntBASIC1.95□□□□□ -2.1
SNX3O60493 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SNX3O60493 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SNX3O60493 Y_RNA.2-201ENST00000362330 96 ntBASIC1.94□□□□□ -2.1
SNX3O60493 RNU6-595P-201ENST00000363944 107 ntBASIC1.94□□□□□ -2.1
SNX3O60493 SNORD115-32-201ENST00000364079 82 ntBASIC1.94□□□□□ -2.1
SNX3O60493 Y_RNA.332-201ENST00000365271 113 ntBASIC1.94□□□□□ -2.1
SNX3O60493 AC004386.2-201ENST00000441858 148 ntBASIC1.94□□□□□ -2.1
SNX3O60493 SNRPEP8-201ENST00000442866 260 ntBASIC1.94□□□□□ -2.1
SNX3O60493 MTCO3P8-201ENST00000453691 755 ntBASIC1.94□□□□□ -2.1
SNX3O60493 RPL7P42-201ENST00000481005 679 ntBASIC1.94□□□□□ -2.1
SNX3O60493 Y_RNA.708-201ENST00000516950 96 ntBASIC1.94□□□□□ -2.1
SNX3O60493 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
SNX3O60493 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX3O60493 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX3O60493 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
SNX3O60493 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
SNX3O60493 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX3O60493 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
SNX3O60493 CTSLP2-204ENST00000629029 392 ntBASIC1.94□□□□□ -2.1
SNX3O60493 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
SNX3O60493 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
SNX3O60493 SNORA5B-201ENST00000363786 132 ntBASIC1.93□□□□□ -2.1
SNX3O60493 SNORD31B-201ENST00000364977 69 ntBASIC1.93□□□□□ -2.1
SNX3O60493 RNU6-438P-201ENST00000365561 103 ntBASIC1.93□□□□□ -2.1
SNX3O60493 Y_RNA.404-201ENST00000383978 102 ntBASIC1.93□□□□□ -2.1
SNX3O60493 SNORA40.19-201ENST00000390846 128 ntBASIC1.93□□□□□ -2.1
SNX3O60493 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
SNX3O60493 AC004866.1-201ENST00000411748 78 ntBASIC1.93□□□□□ -2.1
SNX3O60493 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX3O60493 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX3O60493 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX3O60493 AL121579.1-201ENST00000555129 305 ntBASIC1.93□□□□□ -2.1
SNX3O60493 AC026470.2-201ENST00000561492 181 ntBASIC1.93□□□□□ -2.1
SNX3O60493 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.93□□□□□ -2.1
SNX3O60493 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX3O60493 MIR5006-201ENST00000583027 110 ntBASIC1.93□□□□□ -2.1
SNX3O60493 UBE2V2P2-201ENST00000587677 504 ntBASIC1.93□□□□□ -2.1
SNX3O60493 AC016727.1-205ENST00000605437 569 ntBASIC1.93□□□□□ -2.1
SNX3O60493 RMST_6.1-201ENST00000611980 203 ntBASIC1.93□□□□□ -2.1
SNX3O60493 TCL6_2.1-201ENST00000615162 119 ntBASIC1.93□□□□□ -2.1
SNX3O60493 AL359757.2-201ENST00000624309 274 ntBASIC1.93□□□□□ -2.1
SNX3O60493 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.93□□□□□ -2.1
SNX3O60493 AC099654.5-201ENST00000636479 350 ntBASIC1.93□□□□□ -2.1
SNX3O60493 MTND4P12-201ENST00000498999 1377 ntBASIC1.93□□□□□ -2.1
SNX3O60493 ZNF204P-201ENST00000416749 2397 ntBASIC1.93□□□□□ -2.1
SNX3O60493 MTND5P6-201ENST00000422338 1798 ntBASIC1.93□□□□□ -2.1
SNX3O60493 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNX3O60493 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNX3O60493 RNU6-545P-201ENST00000362681 104 ntBASIC1.92□□□□□ -2.1
SNX3O60493 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
SNX3O60493 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AC123900.1-201ENST00000420390 96 ntBASIC1.92□□□□□ -2.1
SNX3O60493 MTCO3P29-201ENST00000432119 779 ntBASIC1.92□□□□□ -2.1
SNX3O60493 RPS27P21-201ENST00000486977 252 ntBASIC1.92□□□□□ -2.1
SNX3O60493 RNA5SP384-201ENST00000516615 116 ntBASIC1.92□□□□□ -2.1
SNX3O60493 RNU6-1213P-201ENST00000517075 94 ntBASIC1.92□□□□□ -2.1
SNX3O60493 RNU6-58P-201ENST00000517143 103 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AC105029.1-201ENST00000520250 669 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AL590705.4-201ENST00000532209 134 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AC007229.1-201ENST00000590455 412 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AC005014.2-201ENST00000607795 599 ntBASIC1.92□□□□□ -2.1
SNX3O60493 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX3O60493 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.92□□□□□ -2.1
SNX3O60493 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SNX3O60493 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SNX3O60493 BX322639.1-202ENST00000423987 2213 ntBASIC1.91□□□□□ -2.1
SNX3O60493 MIR340-201ENST00000362125 95 ntBASIC1.91□□□□□ -2.1
SNX3O60493 SNORD115-8-201ENST00000363856 82 ntBASIC1.91□□□□□ -2.1
SNX3O60493 SNORD115-38-201ENST00000365037 82 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.405-201ENST00000383979 100 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.451-201ENST00000384200 100 ntBASIC1.91□□□□□ -2.1
SNX3O60493 RNU6-17P-201ENST00000384245 107 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.474-201ENST00000384341 102 ntBASIC1.91□□□□□ -2.1
SNX3O60493 RNU6-1026P-201ENST00000384465 108 ntBASIC1.91□□□□□ -2.1
SNX3O60493 RNU6-18P-201ENST00000384527 107 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.524-201ENST00000384564 100 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.561-201ENST00000384694 100 ntBASIC1.91□□□□□ -2.1
SNX3O60493 RNU6-331P-201ENST00000384724 107 ntBASIC1.91□□□□□ -2.1
SNX3O60493 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
SNX3O60493 MIR153-2-201ENST00000385225 87 ntBASIC1.91□□□□□ -2.1
SNX3O60493 SNORA75.4-201ENST00000391278 119 ntBASIC1.91□□□□□ -2.1
SNX3O60493 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SNX3O60493 NCOR1P3-201ENST00000420479 303 ntBASIC1.91□□□□□ -2.1
SNX3O60493 AL445305.1-201ENST00000432577 575 ntBASIC1.91□□□□□ -2.1
SNX3O60493 AC016925.1-201ENST00000458303 298 ntBASIC1.91□□□□□ -2.1
SNX3O60493 Y_RNA.635-201ENST00000459041 101 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms