Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
HOXA2O43364 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA2O43364 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HOXA2O43364 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA2O43364 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA2O43364 RNU4-13P-201ENST00000364019 141 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 RNU6-32P-201ENST00000383948 107 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 RNU6-13P-201ENST00000384248 107 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 RNU6-12P-201ENST00000384604 107 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 RNU6-41P-201ENST00000384741 107 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 MIR29B2-201ENST00000385055 81 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 AC023449.1-201ENST00000454464 154 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 SNORD65B-201ENST00000459126 73 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA2O43364 GNRHR2P1-201ENST00000555315 631 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 MIR5685-201ENST00000579080 79 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 AC091178.2-201ENST00000584401 117 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 uc_338.14-201ENST00000613162 166 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 AL138721.1-201ENST00000616756 179 ntBASIC4.46□□□□□ -1.7
HOXA2O43364 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HOXA2O43364 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA2O43364 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA2O43364 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA2O43364 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA2O43364 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA2O43364 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA2O43364 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
HOXA2O43364 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA2O43364 AC000403.1-201ENST00000613696 3585 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 Y_RNA.346-201ENST00000365385 112 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA2O43364 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA2O43364 AC006011.1-201ENST00000442758 349 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA2O43364 RPS26P45-201ENST00000471748 340 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 RPL29P14-201ENST00000495837 428 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA2O43364 RNA5SP20-201ENST00000515976 84 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AC008739.2-201ENST00000597006 317 ntBASIC4.45□□□□□ -1.7
HOXA2O43364 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.45□□□□□ -1.7
HOXA2O43364 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA2O43364 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA2O43364 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 AC016588.2-201ENST00000632484 3021 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA2O43364 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXA2O43364 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA2O43364 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
HOXA2O43364 DYNLT3P1-201ENST00000378574 347 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 SNORD14D-201ENST00000384390 87 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 Y_RNA.617-201ENST00000410920 90 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 AL031737.1-201ENST00000450125 223 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 RNU6-221P-201ENST00000459541 99 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 MIR5684-201ENST00000585074 65 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXA2O43364 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA2O43364 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA2O43364 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXA2O43364 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.44□□□□□ -1.7
HOXA2O43364 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXA2O43364 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXA2O43364 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA2O43364 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA2O43364 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA2O43364 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA2O43364 Y_RNA.495-201ENST00000384435 112 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 MIR200C-201ENST00000384980 68 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 SNORA26-201ENST00000391286 122 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 AC126124.2-201ENST00000413542 321 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 AC006028.1-201ENST00000438379 402 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA2O43364 RNU7-14P-201ENST00000459331 62 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 AC027419.1-201ENST00000522976 328 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXA2O43364 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA2O43364 RMST_8.1-201ENST00000610287 165 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 MIR6075-201ENST00000620782 95 ntBASIC4.43□□□□□ -1.7
HOXA2O43364 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA2O43364 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXA2O43364 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA2O43364 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXA2O43364 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXA2O43364 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXA2O43364 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXA2O43364 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA2O43364 SNORA72-201ENST00000384339 132 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR181A2-201ENST00000384863 110 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 MIR670-201ENST00000390142 98 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 Y_RNA.649-201ENST00000459077 103 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 AC080013.2-201ENST00000460866 323 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 RPS29P24-201ENST00000486345 171 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 RNU6-63P-201ENST00000516690 95 ntBASIC4.42□□□□□ -1.7
HOXA2O43364 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA2O43364 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms