Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AC130454.1-201ENST00000622948 401 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPHP1O15259 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
NPHP1O15259 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.45□□□□□ -2.02
NPHP1O15259 SNORD50.1-201ENST00000362987 71 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 RNU6-23P-201ENST00000363283 107 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 SNORD31B-201ENST00000364977 69 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 RNU6-438P-201ENST00000365561 103 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NPHP1O15259 SNRPEP8-201ENST00000442866 260 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 AL035666.1-201ENST00000446195 348 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP1O15259 AC079354.2-201ENST00000453523 154 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 PMCHL2-203ENST00000457791 237 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP1O15259 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.45□□□□□ -2.02
NPHP1O15259 MIR4498-201ENST00000577599 66 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.45□□□□□ -2.02
NPHP1O15259 AC008749.1-201ENST00000597650 306 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 SNRPGP19-201ENST00000603826 189 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 CYP2C61P-201ENST00000604072 290 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 AL773524.1-201ENST00000614065 229 ntBASIC2.45□□□□□ -2.02
NPHP1O15259 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPHP1O15259 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NPHP1O15259 SNORA18.2-201ENST00000383865 132 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 SNORA8-201ENST00000384574 139 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 MIR517A-201ENST00000385001 87 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 MIR1277-201ENST00000408536 78 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 RNA5SP338-201ENST00000410495 85 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 RNA5SP501-201ENST00000410990 112 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 DAP3P1-201ENST00000441522 278 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AL353572.1-201ENST00000442490 417 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AC016925.1-201ENST00000458303 298 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 RNU1-131P-201ENST00000458943 161 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 RPS23P5-201ENST00000495419 428 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AC090255.1-201ENST00000495779 349 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP1O15259 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP1O15259 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.44□□□□□ -2.02
NPHP1O15259 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.44□□□□□ -2.02
NPHP1O15259 AC243960.4-201ENST00000600532 288 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AC016727.2-201ENST00000603988 621 ntBASIC2.44□□□□□ -2.02
NPHP1O15259 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.44□□□□□ -2.02
NPHP1O15259 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.44□□□□□ -2.02
NPHP1O15259 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NPHP1O15259 RNU6-831P-201ENST00000384548 107 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 RNU2-20P-201ENST00000410425 191 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 RNU2-40P-201ENST00000410833 196 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.43□□□□□ -2.02
NPHP1O15259 AC003989.2-201ENST00000440224 169 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 RNU6-717P-201ENST00000459076 104 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 MTCO2P30-201ENST00000503662 364 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.43□□□□□ -2.02
NPHP1O15259 MIR514B-201ENST00000516774 80 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.43□□□□□ -2.02
NPHP1O15259 POLR3GP2-201ENST00000588366 668 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AC005034.5-201ENST00000604219 466 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AL627230.6-201ENST00000611129 280 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AC098657.3-201ENST00000620434 263 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AC006504.8-201ENST00000621046 635 ntBASIC2.43□□□□□ -2.02
NPHP1O15259 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.43□□□□□ -2.02
NPHP1O15259 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPHP1O15259 MIR378A-201ENST00000362177 66 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 RNA5SP190-201ENST00000365222 118 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 RNU6-192P-201ENST00000391253 100 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 FCF1P9-201ENST00000412546 282 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 EIF1P1-201ENST00000421436 341 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 Z82205.1-201ENST00000428456 297 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 MTND1P4-201ENST00000435196 415 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP1O15259 AC087477.1-201ENST00000465747 340 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 RPL23AP75-201ENST00000491601 451 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.42□□□□□ -2.02
NPHP1O15259 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHP1O15259 ANP32BP3-201ENST00000559213 706 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.42□□□□□ -2.02
NPHP1O15259 AP000907.4-201ENST00000604143 237 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 AC007014.2-201ENST00000615581 479 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 AC005562.2-201ENST00000618264 111 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 AC098679.4-201ENST00000624241 654 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
NPHP1O15259 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPHP1O15259 RNA5SP138-201ENST00000365098 114 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 RNU6-1026P-201ENST00000384465 108 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AC244636.1-201ENST00000421152 228 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AL358453.1-201ENST00000422522 250 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AC139712.2-201ENST00000424302 339 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 RPL23AP7-203ENST00000449021 469 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 RNU6-1088P-201ENST00000516850 104 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.41□□□□□ -2.02
NPHP1O15259 AC026470.2-201ENST00000561492 181 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 MIR4781-201ENST00000585250 76 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AL096840.1-201ENST00000603287 93 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 AC131280.1-202ENST00000624067 4211 ntBASIC2.41□□□□□ -2.02
NPHP1O15259 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.41□□□□□ -2.02
NPHP1O15259 AC027514.1-201ENST00000588561 1603 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms