Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SCARNA4-201ENST00000629045 128 ntBASIC2.34□□□□□ -2.03
ATP2A1O14983 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.34□□□□□ -2.03
ATP2A1O14983 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
ATP2A1O14983 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ATP2A1O14983 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.33□□□□□ -2.04
ATP2A1O14983 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATP2A1O14983 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.33□□□□□ -2.04
ATP2A1O14983 RNU6-944P-201ENST00000364023 107 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 RNA5SP37-201ENST00000365420 130 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 Y_RNA.356-201ENST00000365475 113 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 Y_RNA.473-201ENST00000384333 102 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 Y_RNA.597-201ENST00000410463 100 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 Y_RNA.604-201ENST00000410574 102 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 RNA5SP494-201ENST00000410653 129 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 RNU2-41P-201ENST00000410991 178 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 AC243428.1-201ENST00000421099 264 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 CBX3P6-201ENST00000430257 527 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
ATP2A1O14983 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.33□□□□□ -2.04
ATP2A1O14983 RPL23AP75-201ENST00000491601 451 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 RNU6-559P-201ENST00000516151 98 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.33□□□□□ -2.04
ATP2A1O14983 PCGEM1.1-201ENST00000613431 131 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 PISRT1.1-201ENST00000616930 107 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 AC137590.2-201ENST00000619709 240 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATP2A1O14983 ZNF299P-201ENST00000406845 1804 ntBASIC2.33□□□□□ -2.04
ATP2A1O14983 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
ATP2A1O14983 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ATP2A1O14983 Y_RNA.2-201ENST00000362330 96 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 RNU1-23P-201ENST00000363361 144 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 SNORD32B-201ENST00000364460 84 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 RNU4-9P-201ENST00000364951 139 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 Y_RNA.384-201ENST00000383909 102 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 Y_RNA.387-201ENST00000383918 102 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 Y_RNA.490-201ENST00000384413 102 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 RNU6-1297P-201ENST00000384415 104 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 Y_RNA.533-201ENST00000384596 114 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 SNORA75.4-201ENST00000391278 119 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 USMG5P1-201ENST00000425964 177 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.32□□□□□ -2.04
ATP2A1O14983 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.32□□□□□ -2.04
ATP2A1O14983 AL669831.3-213ENST00000636676 183 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.32□□□□□ -2.04
ATP2A1O14983 ZNF72P-201ENST00000425869 1908 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 AC009487.4-201ENST00000624969 3585 ntBASIC2.32□□□□□ -2.04
ATP2A1O14983 RNU6-1188P-201ENST00000363795 107 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 U3.9-201ENST00000363823 204 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.31□□□□□ -2.04
ATP2A1O14983 MIR208B-201ENST00000401172 77 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 AC019129.1-201ENST00000403786 261 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.31□□□□□ -2.04
ATP2A1O14983 snoU13.6-201ENST00000458785 104 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 Y_RNA.638-201ENST00000459374 113 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 AC087477.1-201ENST00000465747 340 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 RPL7P42-201ENST00000481005 679 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.31□□□□□ -2.04
ATP2A1O14983 MTND3P22-201ENST00000510932 243 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 RNU6-307P-201ENST00000516743 106 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 APOOP3-201ENST00000536787 586 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 EIF4A1P12-201ENST00000551910 141 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 AL355375.2-201ENST00000574825 175 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 MIR5690-201ENST00000583739 73 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 MIR203B-201ENST00000636080 86 ntBASIC2.31□□□□□ -2.04
ATP2A1O14983 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ATP2A1O14983 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP2A1O14983 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
ATP2A1O14983 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP2A1O14983 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU6-1159P-201ENST00000362933 107 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU6-595P-201ENST00000363944 107 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 SNORD115-32-201ENST00000364079 82 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 Y_RNA.404-201ENST00000383978 102 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU6-546P-201ENST00000383991 107 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU6-378P-201ENST00000384324 107 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ATP2A1O14983 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATP2A1O14983 AL603825.1-201ENST00000438481 80 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 SNRPEP8-201ENST00000442866 260 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.3□□□□□ -2.04
ATP2A1O14983 OR2AQ1P-201ENST00000451972 200 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.3□□□□□ -2.04
ATP2A1O14983 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 CBX3P8-201ENST00000532412 525 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AC022616.8-201ENST00000533569 253 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 FRG2DP-202ENST00000566967 323 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.3□□□□□ -2.04
ATP2A1O14983 AC005899.2-201ENST00000584353 90 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.3□□□□□ -2.04
ATP2A1O14983 7SK.7-201ENST00000603504 247 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.3□□□□□ -2.04
ATP2A1O14983 MIR6845-201ENST00000613182 61 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 AC112487.2-201ENST00000637950 304 ntBASIC2.3□□□□□ -2.04
ATP2A1O14983 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms