Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 EIF1P1-201ENST00000421436 341 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC188H7C350 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC188H7C350 AL035666.1-201ENST00000446195 348 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 OR2AQ1P-201ENST00000451972 200 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC188H7C350 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC188H7C350 AF186996.7-201ENST00000492781 209 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 MTCO2P30-201ENST00000503662 364 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 SUMO2P18-201ENST00000518873 252 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 AC098679.4-201ENST00000624241 654 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 AL359697.1-201ENST00000624879 587 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 RNU1-76P-201ENST00000362903 159 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC188H7C350 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC188H7C350 MIR549A-201ENST00000385268 96 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNU6-192P-201ENST00000391253 100 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNU2-20P-201ENST00000410425 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNA5SP501-201ENST00000410990 112 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CCDC188H7C350 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC188H7C350 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC188H7C350 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC188H7C350 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC188H7C350 MTND1P11-201ENST00000456661 876 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC188H7C350 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 SNRPGP20-201ENST00000604477 205 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 AC012493.3-201ENST00000604494 112 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 AC005296.1-201ENST00000616145 209 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC188H7C350 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC188H7C350 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC188H7C350 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.94□□□□□ -2.1
CCDC188H7C350 RNU6-545P-201ENST00000362681 104 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 Y_RNA.86-201ENST00000363020 111 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 Y_RNA.135-201ENST00000363439 95 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 RN7SKP32-201ENST00000410167 303 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC188H7C350 AC004386.2-201ENST00000441858 148 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC188H7C350 AC007395.1-201ENST00000451333 677 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 RNU6-864P-201ENST00000516256 108 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC188H7C350 AC015712.3-201ENST00000559380 164 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC188H7C350 RMST_6.1-201ENST00000611980 203 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC083806.3-201ENST00000614016 455 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 AC006504.8-201ENST00000621046 635 ntBASIC1.93□□□□□ -2.1
CCDC188H7C350 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC188H7C350 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 RNU6-541P-201ENST00000384709 110 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 MIR32-201ENST00000384965 70 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC188H7C350 RPS26P42-201ENST00000413485 326 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 DPH3P2-201ENST00000422618 250 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 MTND1P4-201ENST00000435196 415 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC188H7C350 AC074290.1-201ENST00000448883 135 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 RPL23AP3-201ENST00000453844 468 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 PPP1R2P5-201ENST00000457256 603 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AC114982.1-201ENST00000469402 321 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC188H7C350 RPL23AP75-201ENST00000491601 451 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC188H7C350 AC011352.1-201ENST00000512300 793 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC188H7C350 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC188H7C350 MIR4419B-201ENST00000577260 68 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 MIR4790-201ENST00000577799 79 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 MIR4273-201ENST00000582824 84 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
CCDC188H7C350 AC007014.2-201ENST00000615581 479 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms