Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU6-320P-201ENST00000516511 106 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU1-142P-201ENST00000516682 145 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AC004584.2-201ENST00000570407 410 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR4743-201ENST00000584576 69 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AC104695.3-201ENST00000604052 296 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AC026585.1-201ENST00000619582 524 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AC097372.5-201ENST00000623665 376 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORA9.1-201ENST00000362412 131 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORA26.3-201ENST00000391119 136 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AL663109.1-201ENST00000411498 844 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 CDK8P2-201ENST00000415020 547 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AL590632.1-201ENST00000424289 371 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC244670.1-201ENST00000436879 112 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AL049829.1-201ENST00000465411 156 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-948P-201ENST00000516374 107 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 RBM11P1-201ENST00000604951 799 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC104458.1-201ENST00000608243 463 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 AC122133.1-201ENST00000613964 233 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 RMST_2.1-201ENST00000617263 136 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR6734-201ENST00000621166 68 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.5□□□□□ -2.49
CHKB-CPT1BH3BT56 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-378P-201ENST00000384324 107 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-424P-201ENST00000384367 105 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-679P-201ENST00000391003 106 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORA75.6-201ENST00000391318 127 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AC104692.1-201ENST00000472406 90 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AC112206.4-201ENST00000515142 405 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNY4P37-201ENST00000516225 96 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNA5SP220-201ENST00000516298 104 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AP003049.1-201ENST00000529418 457 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AL391840.1-201ENST00000571144 367 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU4-5P-201ENST00000607255 135 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AC138749.5-201ENST00000611461 208 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.51□□□□□ -2.49
CHKB-CPT1BH3BT56 AC073544.1-201ENST00000600110 1595 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-527P-201ENST00000363425 104 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-777P-201ENST00000364265 104 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORD113.3-201ENST00000364630 78 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORA25.9-201ENST00000365087 128 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-43P-201ENST00000384302 107 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-929P-201ENST00000384429 107 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 DEFB130D-201ENST00000426866 237 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 RNA5SP94-201ENST00000516917 108 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC104072.1-201ENST00000568817 668 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR548AC-201ENST00000585049 88 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC004987.4-201ENST00000603383 338 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 7SK.7-201ENST00000603504 247 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AL359075.3-201ENST00000613288 217 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC023158.2-201ENST00000614876 543 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AL450472.1-202ENST00000637286 180 ntBASIC-0.52□□□□□ -2.49
CHKB-CPT1BH3BT56 AC092104.1-201ENST00000497346 1441 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-369P-201ENST00000362515 102 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-792P-201ENST00000363490 107 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-105P-201ENST00000363909 104 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-756P-201ENST00000383997 107 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORA8.2-201ENST00000384372 139 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-747P-201ENST00000390928 104 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-241P-201ENST00000391148 104 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 PDCL2P1-201ENST00000419302 352 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 MRPS10P2-201ENST00000431226 381 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AL606489.2-201ENST00000433886 234 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC005002.2-201ENST00000438228 269 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC004854.1-201ENST00000440356 349 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORD4A-201ENST00000459174 72 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AP000870.1-201ENST00000472927 406 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 RN7SKP164-201ENST00000516138 266 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 MTCO3P15-201ENST00000526563 574 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AP003072.2-201ENST00000527756 676 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC090517.1-201ENST00000569307 266 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR4753-201ENST00000585119 83 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC069545.1-201ENST00000605671 358 ntBASIC-0.53□□□□□ -2.49
CHKB-CPT1BH3BT56 AC009994.1-201ENST00000606889 253 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms