Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.86-201ENST00000363020 111 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORD32B-201ENST00000364460 84 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 U3.13-201ENST00000364804 214 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 SNORA25.9-201ENST00000365087 128 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-128P-201ENST00000383976 107 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 BX510359.4-201ENST00000423750 193 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 MTND1P2-201ENST00000430604 821 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC244670.1-201ENST00000436879 112 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 RNU6-329P-201ENST00000459618 107 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 RN7SKP256-201ENST00000517201 314 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AP000763.2-201ENST00000540641 163 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC026371.1-201ENST00000551867 419 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
TMX2-CTNND1H3BSU7 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-227P-201ENST00000362865 103 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORD50.1-201ENST00000362987 71 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU5B-2P-201ENST00000363036 113 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.151-201ENST00000363566 112 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU1-42P-201ENST00000364033 160 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA25B-201ENST00000365507 128 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-142P-201ENST00000384019 107 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-214P-201ENST00000384130 107 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTCYBP2-201ENST00000407745 171 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RN7SKP158-201ENST00000410453 326 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTND3P9-201ENST00000429526 346 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC012308.1-201ENST00000451232 178 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 TRBVA-201ENST00000498804 316 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU4-49P-201ENST00000516080 140 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-586P-201ENST00000517265 104 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 MRPS36P4-201ENST00000534436 298 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 HSPE1P4-201ENST00000550617 308 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC063943.3-201ENST00000615562 356 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 U6atac.1-201ENST00000616025 117 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC009248.2-201ENST00000619826 254 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORD98-201ENST00000636377 67 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU4-42P-201ENST00000364738 142 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.279-201ENST00000364763 95 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL356776.1-201ENST00000406574 447 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTCO3P46-201ENST00000425787 232 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 MTND1P17-201ENST00000448961 204 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC079354.2-201ENST00000453523 154 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 FO393415.2-201ENST00000480085 343 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC096745.1-201ENST00000509945 370 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC115990.1-201ENST00000526957 301 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 NDUFA5P6-201ENST00000542110 379 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR4299-201ENST00000577899 72 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL034555.1-201ENST00000604816 211 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 MIR1248-201ENST00000629190 106 ntBASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
TMX2-CTNND1H3BSU7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-562P-201ENST00000362731 107 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.339-201ENST00000365325 102 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-784P-201ENST00000384330 106 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 SNORA12-201ENST00000391162 147 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RNU6-1245P-201ENST00000411130 106 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AL590135.1-201ENST00000422215 156 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC019205.3-201ENST00000424573 156 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 AC016700.2-201ENST00000446011 156 ntBASIC1.5□□□□□ -2.17
TMX2-CTNND1H3BSU7 RPL23AP6-201ENST00000446637 472 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms