Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MIR320B2-201ENST00000408479 138 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 RNU6-325P-201ENST00000411132 105 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC004866.1-201ENST00000411748 78 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 SNX2P2-201ENST00000424553 323 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 TIMM9P3-201ENST00000428659 274 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MRPS10P2-201ENST00000431226 381 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MTCO1P19-201ENST00000443487 500 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 RPS26P45-201ENST00000471748 340 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC083798.1-201ENST00000472671 131 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC098862.1-201ENST00000504991 413 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC019288.1-201ENST00000557918 224 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 CPDP1-201ENST00000579660 283 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 MIR8076-201ENST00000611401 83 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC137590.2-201ENST00000619709 240 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.05□□□□□ -2.24
SMKR1H3BMG3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.05□□□□□ -2.24
SMKR1H3BMG3 ELL2P3-201ENST00000457883 1602 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 SNORA33-201ENST00000363664 130 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU6-1322P-201ENST00000364309 107 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU4-20P-201ENST00000365601 151 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 SNORA69-201ENST00000383895 132 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU6-784P-201ENST00000384330 106 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU6-417P-201ENST00000384712 107 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 MIR150-201ENST00000385048 84 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AL627390.1-201ENST00000396055 340 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 MIR1253-201ENST00000408273 105 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC007098.1-201ENST00000420122 367 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AL354695.1-201ENST00000427935 228 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 SRRM1P2-201ENST00000464531 1192 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AF186996.7-201ENST00000492781 209 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 HMGN1P12-201ENST00000499125 195 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC024995.1-201ENST00000523014 93 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AL442163.3-201ENST00000554110 156 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC008269.2-201ENST00000561915 1105 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 CYP3A52P-201ENST00000563326 91 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC100830.2-201ENST00000581636 240 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC092807.2-201ENST00000609367 243 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC009509.4-201ENST00000619202 509 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 AC006001.4-201ENST00000622243 395 ntBASIC1.04□□□□□ -2.24
SMKR1H3BMG3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.287-201ENST00000364853 94 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MIR521-1-201ENST00000384902 87 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 EIF4E2P1-201ENST00000393781 255 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 SNORA11.1-201ENST00000408133 129 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AL358453.1-201ENST00000422522 250 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 RNU7-57P-201ENST00000459540 60 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MTCO1P29-201ENST00000496868 288 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MTND1P35-201ENST00000526739 508 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC074050.1-201ENST00000563247 211 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC006362.1-201ENST00000567392 174 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MIR4742-201ENST00000581069 85 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 MIR4672-201ENST00000583126 81 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.03□□□□□ -2.24
SMKR1H3BMG3 AL590808.1-201ENST00000618696 141 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 SCARNA4-201ENST00000629045 128 ntBASIC1.03□□□□□ -2.24
SMKR1H3BMG3 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 SNORA67.2-201ENST00000384300 149 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 RNU6-933P-201ENST00000384424 107 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 RNA5SP508-201ENST00000411327 119 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 RNU6-57P-201ENST00000411348 103 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 SNRPEP10-201ENST00000420249 274 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL513185.2-201ENST00000425543 193 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 MTCO2P16-201ENST00000436962 677 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 SNRPGP13-201ENST00000442212 177 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL513124.1-201ENST00000450410 614 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 MTND3P16-201ENST00000452205 344 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 RNU7-34P-201ENST00000459394 64 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL163195.1-201ENST00000496941 348 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC010424.1-201ENST00000506336 297 ntBASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.02□□□□□ -2.25
SMKR1H3BMG3 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms