Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.65□□□□□ -2.15
TRIM49D1C9J1S8 AC009541.1-201ENST00000438279 2662 ntBASIC1.65□□□□□ -2.15
TRIM49D1C9J1S8 AC008555.8-201ENST00000623602 2168 ntBASIC1.65□□□□□ -2.15
TRIM49D1C9J1S8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-486P-201ENST00000363116 107 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.142-201ENST00000363491 102 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.356-201ENST00000365475 113 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-128P-201ENST00000383976 107 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AL512604.1-201ENST00000404812 257 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-370P-201ENST00000411008 104 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AC004866.1-201ENST00000411748 78 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AP000275.1-201ENST00000411943 390 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RPS15AP10-201ENST00000432472 382 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AL353997.1-201ENST00000432936 108 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AC012308.1-201ENST00000451232 178 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 MTCO3P10-201ENST00000455912 772 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1037P-201ENST00000459571 107 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 MTCO1P29-201ENST00000496868 288 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNA5SP112-201ENST00000515937 99 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.702-201ENST00000516843 96 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 CBX3P8-201ENST00000532412 525 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RAB11AP2-201ENST00000545905 639 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 UBE2V2P2-201ENST00000587677 504 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AC011494.1-201ENST00000596454 237 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AL034555.1-201ENST00000604816 211 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 AL138963.2-201ENST00000605137 226 ntBASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-874P-201ENST00000362390 105 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-655P-201ENST00000362858 107 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-227P-201ENST00000362865 103 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.166-201ENST00000363730 102 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 SNORA29-201ENST00000384183 140 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-378P-201ENST00000384324 107 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1222P-201ENST00000384615 107 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.604-201ENST00000410574 102 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RN7SKP101-201ENST00000411376 320 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RPS20P15-201ENST00000412792 311 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC243428.1-201ENST00000421099 264 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AL591806.2-201ENST00000433122 173 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC244670.1-201ENST00000436879 112 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 MTND5P20-201ENST00000448677 143 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 PCMTD1P1-201ENST00000455560 355 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 snoU13.23-201ENST00000458863 104 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 snoU13.14-201ENST00000459372 104 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC107032.1-201ENST00000485945 480 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RPL30P10-201ENST00000488148 337 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 HMGB1P35-201ENST00000503360 598 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AL355375.2-201ENST00000574825 175 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC243960.4-201ENST00000600532 288 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 Z98751.3-201ENST00000604447 521 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC018462.2-201ENST00000605375 395 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 AC019193.3-201ENST00000609144 554 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 MIR1302-1-201ENST00000637932 143 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 HAUS6P2-201ENST00000433254 2404 ntBASIC1.63□□□□□ -2.15
TRIM49D1C9J1S8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.67-201ENST00000362870 100 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1210P-201ENST00000363775 107 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-743P-201ENST00000364151 106 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU5E-4P-201ENST00000364931 120 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-867P-201ENST00000364956 107 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-601P-201ENST00000384540 107 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-510P-201ENST00000391239 108 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNA5SP390-201ENST00000410191 113 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU2-48P-201ENST00000410694 191 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.646-201ENST00000410980 101 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC145146.1-201ENST00000496370 254 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RPL23AP63-201ENST00000498752 471 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 SCARNA16.2-201ENST00000516520 172 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC233702.2-202ENST00000562547 291 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 FRG2DP-202ENST00000566967 323 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC124303.1-201ENST00000605703 360 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 AC005014.2-201ENST00000607795 599 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 uc_338.5-201ENST00000611839 155 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 MIR1248-201ENST00000629190 106 ntBASIC1.62□□□□□ -2.15
TRIM49D1C9J1S8 MTND4P12-201ENST00000498999 1377 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RNU5B-2P-201ENST00000363036 113 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RNY3P11-201ENST00000364153 102 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 RNU6-1141P-201ENST00000364520 107 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
TRIM49D1C9J1S8 Y_RNA.597-201ENST00000410463 100 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms