Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC130509.1-201ENST00000464158 433 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC055731.1-201ENST00000474387 401 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC093259.1-201ENST00000509755 300 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-864P-201ENST00000516256 108 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 RN7SKP256-201ENST00000517201 314 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AP005639.2-201ENST00000527592 928 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 MIR4498-201ENST00000577599 66 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 AC009248.2-201ENST00000619826 254 ntBASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-562P-201ENST00000362731 107 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 RNU5B-2P-201ENST00000363036 113 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 SNORD48-201ENST00000364953 64 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MIR518A2-201ENST00000384966 87 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MIR517A-201ENST00000385001 87 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MIR29B2-201ENST00000385055 81 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 SNORA67.6-201ENST00000391093 99 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 BTF3L4P2-201ENST00000392798 346 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MIR1323-201ENST00000408090 73 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 RPS20P15-201ENST00000412792 311 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 UBE2V1P4-201ENST00000425374 344 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC078809.1-201ENST00000427601 140 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 HMGN2P18-201ENST00000450680 270 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC079354.2-201ENST00000453523 154 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AL163540.1-201ENST00000485382 386 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MTCO1P29-201ENST00000496868 288 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC016632.1-201ENST00000503994 196 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC018710.1-201ENST00000506509 158 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.676-201ENST00000516393 96 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-1098P-201ENST00000516772 96 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC115990.1-201ENST00000526957 301 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC018630.3-201ENST00000542637 96 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC021231.3-201ENST00000558497 370 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC015720.1-201ENST00000565251 277 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 MIR4742-201ENST00000581069 85 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC010928.2-201ENST00000588017 287 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC018638.8-201ENST00000588755 281 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC016727.2-201ENST00000603988 621 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC092794.1-201ENST00000612734 582 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AL359314.1-201ENST00000616913 261 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 AC009033.1-201ENST00000624279 431 ntBASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAV40A0A0B4J280 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNU1-42P-201ENST00000364033 160 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 SNORA18.2-201ENST00000383865 132 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-790P-201ENST00000384479 105 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-1093P-201ENST00000391194 107 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 MIR208B-201ENST00000401172 77 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AL356776.1-201ENST00000406574 447 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNA5SP450-201ENST00000411206 102 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC012306.1-201ENST00000423267 114 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 SNRPEP8-201ENST00000442866 260 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AL137159.1-201ENST00000452808 512 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-329P-201ENST00000459618 107 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 TOMM22P6-201ENST00000465035 409 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC022447.4-201ENST00000504053 364 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC079140.5-201ENST00000507882 310 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 Y_RNA.682-201ENST00000516457 100 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 RNU6-358P-201ENST00000516564 75 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AP005660.1-201ENST00000522972 293 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AF235103.2-201ENST00000525753 346 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 DNAJC19P9-201ENST00000555084 351 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 MIR3923-201ENST00000579521 83 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 MIR3136-201ENST00000583498 78 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 MIR8076-201ENST00000611401 83 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AL162373.1-201ENST00000620433 407 ntBASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV40A0A0B4J280 AP000560.1-201ENST00000624150 1937 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC092268.1-201ENST00000342691 405 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.184-201ENST00000363884 108 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-842P-201ENST00000384269 107 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-373P-201ENST00000411247 98 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RPL31P63-201ENST00000422565 375 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 USP9YP30-201ENST00000430729 455 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 FGF7P6-202ENST00000451282 293 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms