Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 RN7SL429P-201ENST00000479090 223 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RPL26P26-201ENST00000480251 434 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RN7SL489P-201ENST00000486185 223 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RN7SL327P-201ENST00000488659 223 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RPS23P5-201ENST00000495419 428 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 HMGB1P29-201ENST00000505659 499 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AC010493.1-201ENST00000513479 292 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 SNORA40.12-201ENST00000516329 111 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RNU6-612P-201ENST00000516909 102 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RNU6-856P-201ENST00000516959 98 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AC073648.5-201ENST00000603502 305 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 RN7SL853P-201ENST00000617250 223 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AC008147.4-201ENST00000617570 1204 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 AP000770.2-201ENST00000623694 100 ntBASIC1.1□□□□□ -2.23
LRRC42Q9Y546 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LRRC42Q9Y546 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LRRC42Q9Y546 MIR302D-201ENST00000362275 68 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 RNU6-862P-201ENST00000362804 105 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 Y_RNA.255-201ENST00000364581 97 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 SNORA18.2-201ENST00000383865 132 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 MIR520A-201ENST00000384862 85 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 MIR548B-201ENST00000385247 97 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 RNU6-1093P-201ENST00000391194 107 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL117342.1-201ENST00000404861 406 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 RNU6-174P-201ENST00000410406 106 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 MTCO1P21-201ENST00000416634 589 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL606489.2-201ENST00000433886 234 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL121890.1-201ENST00000435457 205 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC42Q9Y546 HSPE1P9-201ENST00000440046 311 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC010095.1-201ENST00000443543 144 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC42Q9Y546 snoU13.30-201ENST00000458951 104 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 HMGN2P9-201ENST00000476875 229 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.09□□□□□ -2.23
LRRC42Q9Y546 RNU6-189P-201ENST00000516120 101 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 RNU6-323P-201ENST00000521915 107 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC007834.2-201ENST00000536310 343 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC016256.1-201ENST00000547971 354 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL161670.1-201ENST00000554348 137 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL118558.2-201ENST00000556294 238 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 HMGB1P33-201ENST00000563485 527 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC008088.1-201ENST00000580993 280 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC087683.1-201ENST00000591187 441 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC025811.1-201ENST00000604312 472 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AL645939.4-201ENST00000604495 135 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 AC064836.2-201ENST00000609491 462 ntBASIC1.09□□□□□ -2.23
LRRC42Q9Y546 Y_RNA.1-201ENST00000352915 104 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6-545P-201ENST00000362681 104 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6-227P-201ENST00000362865 103 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6-271P-201ENST00000363858 105 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 SNORA63D-201ENST00000364359 132 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6-877P-201ENST00000383868 107 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 SNORD116-8-201ENST00000384365 95 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 TPTE2P5-203ENST00000458118 728 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6-1037P-201ENST00000459571 107 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 MTCO3P38-201ENST00000468910 766 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC091435.1-201ENST00000505442 584 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 HMGN1P13-201ENST00000505795 138 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC108078.1-201ENST00000508073 725 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC091133.4-201ENST00000511142 308 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU1-92P-201ENST00000517017 135 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.08□□□□□ -2.24
LRRC42Q9Y546 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AL512598.1-201ENST00000610158 273 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC103705.1-201ENST00000619013 241 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 Z69908.1-201ENST00000622603 247 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 AC010615.1-201ENST00000594254 1764 ntBASIC1.08□□□□□ -2.24
LRRC42Q9Y546 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU6-562P-201ENST00000362731 107 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU6-1106P-201ENST00000390845 107 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 AL663109.1-201ENST00000411498 844 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 ARL5AP1-201ENST00000418991 388 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 MTND3P9-201ENST00000429526 346 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 TOMM22P2-201ENST00000430735 237 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RPS3AP17-201ENST00000472594 777 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 AC025465.4-201ENST00000513422 638 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU6-1041P-201ENST00000516254 102 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU6-1038P-201ENST00000516516 104 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 RNU6-1069P-201ENST00000516612 133 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 CENPUP1-201ENST00000526649 1202 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 OSBPL9P5-201ENST00000542581 171 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.07□□□□□ -2.24
LRRC42Q9Y546 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 MIR3976-201ENST00000606807 139 ntBASIC1.07□□□□□ -2.24
LRRC42Q9Y546 AC007684.1-201ENST00000609671 477 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms