Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 RPS26P48-201ENST00000491713 339 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 RNU6-1098P-201ENST00000516772 96 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 EIF4A1P12-201ENST00000551910 141 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AC110760.3-201ENST00000598794 467 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AL158042.1-201ENST00000605338 460 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SNORA4.2-201ENST00000365313 147 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SNORD116.1-201ENST00000365628 92 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 Y_RNA.480-201ENST00000384364 102 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AL031577.2-201ENST00000404133 280 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AC011233.1-201ENST00000422812 283 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 RNU7-14P-201ENST00000459331 62 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AC024995.1-201ENST00000523014 93 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AC012557.2-201ENST00000605919 418 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 AL139022.2-201ENST00000606934 443 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 PCGEM1.1-201ENST00000613431 131 ntBASIC0.36□□□□□ -2.35
SCN8AQ9UQD0 MTND4P5-201ENST00000435821 1374 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 U3.8-201ENST00000363675 217 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 SNORA32.2-201ENST00000384049 122 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 RNA5SP467-201ENST00000391274 118 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 RNU2-72P-201ENST00000411175 163 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 MTATP6P20-201ENST00000414147 562 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 RPL39P39-201ENST00000455840 151 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 AC002350.1-201ENST00000490759 375 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 RNU6-197P-201ENST00000516680 100 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 AC109810.1-201ENST00000534066 224 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 MIR5697-201ENST00000578045 78 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 AL162424.1-201ENST00000602325 221 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 AC078795.3-201ENST00000602913 472 ntBASIC0.35□□□□□ -2.35
SCN8AQ9UQD0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 RNU4-79P-201ENST00000362764 141 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 RNU4-48P-201ENST00000365559 182 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 RNU6-1257P-201ENST00000384625 110 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 RNA5SP299-201ENST00000391203 116 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 MTCO3P18-201ENST00000440206 761 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 MTCYBP1-201ENST00000454315 1119 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 AC010486.2-201ENST00000505572 483 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 MTND3P25-201ENST00000509243 135 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 MTCO3P7-201ENST00000510008 774 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 RNU2-34P-201ENST00000516534 121 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 AP002453.2-201ENST00000533503 320 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 AC022432.1-201ENST00000595739 310 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 uc_338.11-201ENST00000619132 160 ntBASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.34□□□□□ -2.35
SCN8AQ9UQD0 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 Y_RNA.178-201ENST00000363832 102 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 SNORD12-201ENST00000391002 90 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 RNU7-90P-201ENST00000459216 62 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 RNU7-94P-201ENST00000459576 63 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC117522.1-201ENST00000509821 380 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 RNU6-377P-201ENST00000515965 102 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 Y_RNA.681-201ENST00000516445 113 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 MIR3118-1-201ENST00000581787 76 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 BCRP9-201ENST00000605312 388 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC104458.1-201ENST00000608243 463 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC104465.1-201ENST00000611365 139 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 MIR8054-201ENST00000620877 86 ntBASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.34□□□□□ -2.36
SCN8AQ9UQD0 RNA5SP361-201ENST00000362686 118 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 RNU6-1026P-201ENST00000384465 108 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 MTND4P14-201ENST00000435799 1354 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 HSPE1P23-201ENST00000509838 286 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 AC105185.1-201ENST00000518705 535 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 AC126177.8-201ENST00000618339 1015 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 BX322639.1-202ENST00000423987 2213 ntBASIC0.33□□□□□ -2.36
SCN8AQ9UQD0 CASC19-280ENST00000642102 1351 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 RNU6-190P-201ENST00000384154 102 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC114491.1-201ENST00000416095 246 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL133396.1-201ENST00000432048 687 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL049829.1-201ENST00000465411 156 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC016632.1-201ENST00000503994 196 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC023050.3-201ENST00000541142 333 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC016256.1-201ENST00000547971 354 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC091489.2-201ENST00000566263 604 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AL929325.1-201ENST00000603096 117 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC097372.5-201ENST00000623665 376 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 MIR338-201ENST00000636369 67 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 AC245060.5-201ENST00000610778 3293 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 RNU6-222P-201ENST00000362438 107 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 Y_RNA.97-201ENST00000363094 102 ntBASIC0.32□□□□□ -2.36
SCN8AQ9UQD0 CDK8P2-201ENST00000415020 547 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms