Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RNU4-15P-201ENST00000362613 141 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.106-201ENST00000363189 100 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 MIR32-201ENST00000384965 70 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 RNU6-823P-201ENST00000391042 103 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 FO393413.1-201ENST00000402892 195 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 Z98742.2-201ENST00000431564 187 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AC087499.2-201ENST00000432861 149 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 RPS3P1-201ENST00000456781 192 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 MTND5P22-201ENST00000458380 195 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 RPL22P13-201ENST00000493291 347 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS4AQ9UN37 RNU6-567P-201ENST00000516746 107 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.721-201ENST00000517207 102 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AC022616.4-201ENST00000522985 181 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AC008737.2-201ENST00000599446 118 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 AL034555.1-201ENST00000604816 211 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 U2.1-201ENST00000618978 145 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 Z75746.1-201ENST00000440243 2080 ntBASIC2.73□□□□□ -1.97
VPS4AQ9UN37 OR56A5-201ENST00000340110 738 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNU6-212P-201ENST00000362642 104 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNU6-655P-201ENST00000362858 107 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNU1-72P-201ENST00000362976 153 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.455-201ENST00000384230 98 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 Y_RNA.557-201ENST00000384680 107 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 MIR627-201ENST00000384979 97 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 MIR548F4-201ENST00000408515 105 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AL358176.2-201ENST00000425769 204 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC096644.2-201ENST00000429278 159 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 U8.22-201ENST00000459141 133 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 TOMM22P6-201ENST00000465035 409 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNA5SP112-201ENST00000515937 99 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RN7SKP132-201ENST00000516001 208 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNU2-53P-201ENST00000516257 147 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 RNU6-764P-201ENST00000516396 105 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC090617.3-201ENST00000573670 475 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AC113195.1-201ENST00000579952 141 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 MIR4765-201ENST00000585007 77 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AL162730.1-201ENST00000605734 292 ntBASIC2.72□□□□□ -1.97
VPS4AQ9UN37 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS4AQ9UN37 MTND5P16-201ENST00000460269 1703 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 Y_RNA.133-201ENST00000363428 110 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 U3.13-201ENST00000364804 214 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 SNORA70B-201ENST00000384210 135 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 Y_RNA.605-201ENST00000410577 105 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 EIF1P2-201ENST00000428233 350 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 RPS15AP7-201ENST00000439294 405 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 snoU13.6-201ENST00000458785 104 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 SNORA31.15-201ENST00000516771 132 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 RNU6-58P-201ENST00000517143 103 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AL442163.3-201ENST00000554110 156 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AC006600.1-201ENST00000572529 153 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 AC103810.1-201ENST00000579873 453 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 MIR7843-201ENST00000622274 79 ntBASIC2.71□□□□□ -1.98
VPS4AQ9UN37 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS4AQ9UN37 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU6-1159P-201ENST00000362933 107 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 Y_RNA.153-201ENST00000363615 91 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU6-1180P-201ENST00000364935 107 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 Y_RNA.358-201ENST00000365491 99 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU6-159P-201ENST00000391080 106 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU2-25P-201ENST00000411041 191 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AL590556.1-201ENST00000423231 483 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 U8.20-201ENST00000459445 131 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU7-169P-201ENST00000459456 61 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AP000870.1-201ENST00000472927 406 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AC107032.1-201ENST00000485945 480 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AC132942.1-201ENST00000486753 483 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 RNU6-1046P-201ENST00000516538 107 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AL117187.1-201ENST00000555482 181 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 MIR3923-201ENST00000579521 83 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
VPS4AQ9UN37 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
VPS4AQ9UN37 PCGEM1.1-201ENST00000613431 131 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms