Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC105245.1-201ENST00000581934 244 ntBASIC3□□□□□ -1.93
HDAC9Q9UKV0 MIR3171-201ENST00000584270 74 ntBASIC3□□□□□ -1.93
HDAC9Q9UKV0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3□□□□□ -1.93
HDAC9Q9UKV0 AC007792.1-201ENST00000623023 402 ntBASIC3□□□□□ -1.93
HDAC9Q9UKV0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDAC9Q9UKV0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.252-201ENST00000364556 101 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 RNU6-968P-201ENST00000384076 107 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.496-201ENST00000384444 101 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.504-201ENST00000384481 104 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC138623.1-201ENST00000418060 216 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AIMP1P2-201ENST00000425294 312 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC244670.1-201ENST00000436879 112 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC112771.1-201ENST00000463581 102 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 RN7SL297P-201ENST00000483161 293 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 RPL36AP48-201ENST00000485521 314 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 RPL30P10-201ENST00000488148 337 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AF186996.7-201ENST00000492781 209 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC104564.1-201ENST00000493028 407 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC016632.1-201ENST00000503994 196 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 SNORA25.11-201ENST00000515935 105 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.711-201ENST00000516993 102 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 MIR1273D-201ENST00000577266 86 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
HDAC9Q9UKV0 AC233981.2-201ENST00000611524 1614 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 AC092268.1-201ENST00000342691 405 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 RNU1-91P-201ENST00000364746 163 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.326-201ENST00000365176 113 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 SNORA29-201ENST00000384183 140 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 SNORA36A-201ENST00000384221 132 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 MIR186-201ENST00000384988 86 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 RNU6-308P-201ENST00000390957 107 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 RPL30P4-201ENST00000429309 333 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 SCARNA4-201ENST00000629045 128 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 AC080100.1-201ENST00000624239 5356 ntBASIC2.98□□□□□ -1.93
HDAC9Q9UKV0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 Y_RNA.216-201ENST00000364205 93 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 RNU6-99P-201ENST00000364721 107 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 MIR1287-201ENST00000408492 90 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 Z82188.1-201ENST00000436709 154 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 GPM6BP3-201ENST00000442797 145 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL035666.1-201ENST00000446195 348 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 HMGN2P23-201ENST00000456759 269 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 RPL23AP75-201ENST00000491601 451 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 SNORA31.16-201ENST00000516773 139 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 RNU6-264P-201ENST00000517134 104 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AC115990.1-201ENST00000526957 301 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AP003072.1-201ENST00000531740 145 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL590705.4-201ENST00000532209 134 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AC021269.2-201ENST00000532318 330 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 MIR4446-201ENST00000578505 67 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 MIR4658-201ENST00000584344 65 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AC010928.2-201ENST00000588017 287 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AC073410.2-201ENST00000603240 332 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL078605.1-201ENST00000603529 500 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL359198.2-201ENST00000611836 194 ntBASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.97□□□□□ -1.93
HDAC9Q9UKV0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNU6-212P-201ENST00000362642 104 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 SNORA38-201ENST00000363946 132 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 U3.13-201ENST00000364804 214 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNU6-142P-201ENST00000384019 107 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNU1-57P-201ENST00000384491 166 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 Y_RNA.577-201ENST00000384794 101 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNA5SP494-201ENST00000410653 129 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AC097463.2-201ENST00000421074 142 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AC008267.5-201ENST00000424928 265 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 SUMO1P4-201ENST00000429430 302 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 MTCO3P29-201ENST00000432119 779 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RN7SKP210-201ENST00000459176 261 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RPL23AP42-201ENST00000471152 471 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 RNU1-104P-201ENST00000517280 175 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AC007375.1-201ENST00000554513 578 ntBASIC2.96□□□□□ -1.94
HDAC9Q9UKV0 AC022432.1-201ENST00000595739 310 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms