Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 AC073349.3-201ENST00000617616 186 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 MIR3674-201ENST00000636576 68 ntBASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC42EP3Q9UKI2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 MAPK10-266ENST00000641066 6555 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-655P-201ENST00000362858 107 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 SNORA38.1-201ENST00000364172 131 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNA5SP51-201ENST00000364750 119 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6-47P-201ENST00000383866 107 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 MIR128-1-201ENST00000384921 82 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 COX6CP10-201ENST00000416832 224 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC091179.1-201ENST00000461606 579 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AL049873.1-201ENST00000480540 376 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RPL23AP94-201ENST00000512518 302 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AL512605.2-201ENST00000592972 256 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 RMST_8.1-201ENST00000610287 165 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 TCL6_2.1-201ENST00000615162 119 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 MIR8058-201ENST00000615737 89 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AL591424.2-201ENST00000617023 128 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC005562.2-201ENST00000618264 111 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC018692.3-201ENST00000623929 123 ntBASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.09□□□□□ -1.91
CDC42EP3Q9UKI2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
CDC42EP3Q9UKI2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.09□□□□□ -1.92
CDC42EP3Q9UKI2 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDC42EP3Q9UKI2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 AC092593.1-201ENST00000515413 1815 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-727P-201ENST00000363592 107 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-1020P-201ENST00000363684 107 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-1264P-201ENST00000383891 107 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-918P-201ENST00000391219 106 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 CYCSP4-201ENST00000429682 331 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 AP001486.1-201ENST00000463339 476 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 AC145146.1-201ENST00000496370 254 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNU2-12P-201ENST00000517216 168 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 AC026241.1-201ENST00000517873 2142 ntBASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP3Q9UKI2 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.415-201ENST00000384012 112 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 Y_RNA.435-201ENST00000384095 112 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 RNA5SP504-201ENST00000410676 117 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC004386.2-201ENST00000441858 148 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC009237.7-201ENST00000447357 229 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC112771.1-201ENST00000463581 102 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-155P-201ENST00000516347 100 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-861P-201ENST00000516745 106 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-255P-201ENST00000516957 105 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC027176.1-201ENST00000560204 514 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 MIR4474-201ENST00000579189 78 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 MIR4425-201ENST00000580572 84 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 MIR6852-201ENST00000621699 66 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC068205.3-201ENST00000636385 468 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 AC069528.2-201ENST00000624849 1991 ntBASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC42EP3Q9UKI2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 RNU4-80P-201ENST00000363200 141 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 RNU6-454P-201ENST00000364292 107 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 SNORA14A-201ENST00000364773 135 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 SNORA67.2-201ENST00000384300 149 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 RNA5SP475-201ENST00000410568 110 ntBASIC3.06□□□□□ -1.92
CDC42EP3Q9UKI2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms