Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SNORA46.1-201ENST00000391069 153 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RNU6-121P-201ENST00000410525 99 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RN7SKP123-201ENST00000410732 291 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 AL390729.2-201ENST00000416137 156 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RPL21P38-201ENST00000418090 167 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 UQCRBP2-201ENST00000447827 297 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RNU1-143P-201ENST00000516296 146 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 AC136932.1-201ENST00000574771 208 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 MIR4506-201ENST00000584693 77 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RPL17P51-201ENST00000605218 238 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 U1.23-201ENST00000610293 146 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 RNU1-68P-201ENST00000615382 146 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 U1.39-201ENST00000621562 146 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 AC090517.3-201ENST00000625170 141 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
DDX41Q9UJV9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
DDX41Q9UJV9 RNU1-70P-201ENST00000362618 164 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 RNU6-937P-201ENST00000384325 106 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 RNU2-25P-201ENST00000411041 191 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 AC027124.2-201ENST00000428249 105 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 MICF-203ENST00000432679 129 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX41Q9UJV9 SNORD127-201ENST00000458892 86 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 RNU6-1132P-201ENST00000459214 107 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 AC006483.1-201ENST00000487308 313 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 AC140059.1-201ENST00000489238 361 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.71□□□□□ -1.82
DDX41Q9UJV9 MIR4325-201ENST00000583049 90 ntBASIC3.71□□□□□ -1.82
DDX41Q9UJV9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX41Q9UJV9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX41Q9UJV9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
DDX41Q9UJV9 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 SNORD81.1-201ENST00000363064 77 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 RNU6-626P-201ENST00000363354 107 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.307-201ENST00000365022 117 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 MIR549A-201ENST00000385268 96 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 RNU2-20P-201ENST00000410425 191 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 RN7SL75P-201ENST00000461926 281 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 S100A11P2-201ENST00000467589 312 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC109925.1-201ENST00000478069 331 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AL049873.1-201ENST00000480540 376 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC098869.1-201ENST00000481627 292 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 AL035425.3-201ENST00000564206 4996 ntBASIC3.7□□□□□ -1.82
DDX41Q9UJV9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX41Q9UJV9 SNORD113-8-201ENST00000363497 74 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.350-201ENST00000365409 98 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.602-201ENST00000410535 92 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 RNU6-847P-201ENST00000411115 108 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AL353705.1-201ENST00000433468 480 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC244505.4-201ENST00000434905 287 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC005002.2-201ENST00000438228 269 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 SSXP5-201ENST00000443473 287 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AP001486.1-201ENST00000463339 476 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 RPL39P38-201ENST00000467018 153 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC117440.1-201ENST00000474107 571 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 SEPT14P8-201ENST00000508026 178 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC023157.2-201ENST00000540596 141 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AK6P2-201ENST00000549020 471 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC233702.2-202ENST00000562547 291 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 MIR5006-201ENST00000583027 110 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 MIR4298-201ENST00000584380 73 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 MZT1P2-201ENST00000604387 248 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 AC011373.1-201ENST00000607270 237 ntBASIC3.69□□□□□ -1.82
DDX41Q9UJV9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX41Q9UJV9 MTND5P6-201ENST00000422338 1798 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX41Q9UJV9 RNU6-20P-201ENST00000384106 107 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 RNU6-21P-201ENST00000384710 107 ntBASIC3.68□□□□□ -1.82
DDX41Q9UJV9 Y_RNA.581-201ENST00000391017 97 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms