Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AL391840.1-201ENST00000571144 367 ntBASIC1.44□□□□□ -2.18
CTNNA3Q9UI47 AP001836.1-201ENST00000604675 523 ntBASIC1.44□□□□□ -2.18
CTNNA3Q9UI47 PCGEM1.1-201ENST00000613431 131 ntBASIC1.44□□□□□ -2.18
CTNNA3Q9UI47 AC100821.1-201ENST00000523153 2479 ntBASIC1.44□□□□□ -2.18
CTNNA3Q9UI47 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CTNNA3Q9UI47 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 Y_RNA.354-201ENST00000365448 111 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RNU6-438P-201ENST00000365561 103 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RNU5A-6P-201ENST00000384136 116 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RNU6-342P-201ENST00000384521 104 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AL590135.1-201ENST00000422215 156 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC019205.3-201ENST00000424573 156 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC002486.1-201ENST00000435098 391 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 MTCO2P3-201ENST00000442543 421 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC016700.2-201ENST00000446011 156 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RPL9P9-202ENST00000466501 579 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 SNRPGP7-201ENST00000469016 106 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RPL26P26-201ENST00000480251 434 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC015911.1-201ENST00000495111 156 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC008628.2-201ENST00000502605 298 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC079140.2-201ENST00000506193 142 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 ARL2BPP4-201ENST00000506854 471 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RNU6-430P-201ENST00000517078 107 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC090821.2-201ENST00000523552 176 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AL137100.2-201ENST00000555786 315 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC021231.3-201ENST00000558497 370 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC005668.1-201ENST00000571142 476 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AC002044.1-201ENST00000606707 158 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 AL450472.1-202ENST00000637286 180 ntBASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CTNNA3Q9UI47 RNU6-552P-201ENST00000362869 119 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 Y_RNA.159-201ENST00000363674 87 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 U3.9-201ENST00000363823 204 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 Y_RNA.201-201ENST00000364052 96 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 RNU6-296P-201ENST00000384608 107 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 MIR520A-201ENST00000384862 85 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC139712.2-201ENST00000424302 339 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 COX6CP14-201ENST00000469580 174 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 EIF4A1P12-201ENST00000551910 141 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 CYP4A27P-201ENST00000567218 190 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC110760.3-201ENST00000598794 467 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC064807.4-201ENST00000607201 407 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AL355802.3-201ENST00000607571 545 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC008147.4-201ENST00000617570 1204 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC136475.10-201ENST00000620253 385 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 AC068205.3-201ENST00000636385 468 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 MTND4P14-201ENST00000435799 1354 ntBASIC1.42□□□□□ -2.18
CTNNA3Q9UI47 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 MIR340-201ENST00000362125 95 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 Y_RNA.36-201ENST00000362602 112 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 SNORD33-201ENST00000362761 85 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 HSPE1P9-201ENST00000440046 311 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 SNRPEP8-201ENST00000442866 260 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 RPL31P3-201ENST00000458430 332 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 RNU7-180P-201ENST00000459240 63 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 SNORA31.16-201ENST00000516773 139 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 SNORD60.2-201ENST00000516883 86 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AC090115.3-201ENST00000553218 849 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 SUB1P2-201ENST00000556401 297 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 AC069114.2-201ENST00000604699 304 ntBASIC1.41□□□□□ -2.18
CTNNA3Q9UI47 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CTNNA3Q9UI47 RNU1-76P-201ENST00000362903 159 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 Y_RNA.169-201ENST00000363745 96 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MIR598-201ENST00000384868 97 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 RNU6-360P-201ENST00000390944 104 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MTCO1P21-201ENST00000416634 589 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 RPS27P16-201ENST00000425758 201 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MTCO3P38-201ENST00000468910 766 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.4□□□□□ -2.19
CTNNA3Q9UI47 MIR4528-201ENST00000577763 90 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms