Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 MIR1283-2-201ENST00000408621 87 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 RNA5SP118-201ENST00000410385 109 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 Y_RNA.619-201ENST00000410951 90 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 HMGN2P3-201ENST00000433603 273 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 HMGN2P5-201ENST00000436882 273 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AL353572.1-201ENST00000442490 417 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 SNRPEP8-201ENST00000442866 260 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC132942.1-201ENST00000486753 483 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AF186996.7-201ENST00000492781 209 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 RNU6-864P-201ENST00000516256 108 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 RNU6-1088P-201ENST00000516850 104 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 FGF7P1-201ENST00000582820 288 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC005520.5-201ENST00000613926 164 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC093913.1-201ENST00000614178 329 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC002553.4-201ENST00000616896 331 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 AC006504.8-201ENST00000621046 635 ntBASIC1.67□□□□□ -2.14
EXOSC3Q9NQT5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC233981.2-201ENST00000611524 1614 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 SNORD50.1-201ENST00000362987 71 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 SNORA18.2-201ENST00000383865 132 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 RNU6-784P-201ENST00000384330 106 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 MIR487A-201ENST00000385009 80 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 MIR17-201ENST00000385012 84 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 SNORA12.2-201ENST00000391040 156 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 RNU7-14P-201ENST00000459331 62 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 TOMM22P6-201ENST00000465035 409 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC082651.2-201ENST00000496833 166 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 RNU4-49P-201ENST00000516080 140 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 RNU5F-4P-201ENST00000516581 114 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 DEFB131C-201ENST00000528817 165 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 MIR4287-201ENST00000579398 78 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 POLR3GP2-201ENST00000588366 668 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC016727.2-201ENST00000603988 621 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 AC019193.3-201ENST00000609144 554 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.66□□□□□ -2.14
EXOSC3Q9NQT5 SNORD114-6-201ENST00000364393 72 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 SNORA40.19-201ENST00000390846 128 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 Y_RNA.599-201ENST00000410489 109 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 RN7SKP284-201ENST00000411002 343 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 MTND4LP16-201ENST00000440828 295 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 FTH1P25-201ENST00000447665 469 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AC087477.1-201ENST00000465747 340 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 UBL5P3-201ENST00000475112 231 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AC016256.1-201ENST00000547971 354 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AC013412.1-201ENST00000610687 192 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AL590240.4-201ENST00000616908 390 ntBASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
EXOSC3Q9NQT5 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 RNU6-438P-201ENST00000365561 103 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 Y_RNA.505-201ENST00000384489 102 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 RPL30P16-201ENST00000419341 429 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC079354.2-201ENST00000453523 154 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 PMCHL2-203ENST00000457791 237 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 RPL23AP75-201ENST00000491601 451 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 MTCO2P30-201ENST00000503662 364 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 MTND4LP26-201ENST00000518144 282 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.64□□□□□ -2.15
EXOSC3Q9NQT5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms