Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC005534.2-201ENST00000431047 433 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 Z82188.1-201ENST00000436709 154 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AL353705.4-201ENST00000449661 238 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.631-201ENST00000459607 101 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 RPL23AP75-201ENST00000491601 451 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 HMGB1P35-201ENST00000503360 598 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 RNU2-53P-201ENST00000516257 147 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.2□□□□□ -2.06
SIX2Q9NPC8 MIR5089-201ENST00000580047 84 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 MIR3136-201ENST00000583498 78 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 SNRPGP17-201ENST00000603780 214 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 MIR7157-201ENST00000635801 60 ntBASIC2.2□□□□□ -2.06
SIX2Q9NPC8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RNU1-72P-201ENST00000362976 153 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.252-201ENST00000364556 101 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RNU6-99P-201ENST00000364721 107 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.577-201ENST00000384794 101 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 CBX3P9-201ENST00000402326 552 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RN7SKP223-201ENST00000410582 62 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RNA5SP494-201ENST00000410653 129 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RNA5SP492-201ENST00000411330 114 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MRPS18CP6-201ENST00000423587 223 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC018865.2-201ENST00000423631 129 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MTCO3P29-201ENST00000432119 779 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 UBBP3-201ENST00000445497 241 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC087477.1-201ENST00000465747 340 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC021146.2-201ENST00000504736 556 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 SCARNA3-201ENST00000517097 143 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC104581.2-201ENST00000572227 430 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 MIR3199-1-201ENST00000582434 88 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC010928.2-201ENST00000588017 287 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 Z98751.3-201ENST00000604447 521 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AL034555.1-201ENST00000604816 211 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC091925.1-201ENST00000623204 462 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SIX2Q9NPC8 AC080128.1-201ENST00000474389 1917 ntBASIC2.19□□□□□ -2.06
SIX2Q9NPC8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.31-201ENST00000362574 102 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.132-201ENST00000363421 102 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 SNORD115-32-201ENST00000364079 82 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 SNORA51.11-201ENST00000384442 131 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.496-201ENST00000384444 101 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MIR634-201ENST00000385208 97 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 SNORA12.2-201ENST00000391040 156 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 PMCHL1-202ENST00000423102 261 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MTCYBP10-201ENST00000424905 650 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 RPS15AP7-201ENST00000439294 405 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 snoU13.30-201ENST00000458951 104 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 UBE2DNL-203ENST00000474922 222 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 RPL23AP70-201ENST00000483361 460 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AC008413.1-201ENST00000511864 177 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AC004584.2-201ENST00000570407 410 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MIR4446-201ENST00000578505 67 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MIR3171-201ENST00000584270 74 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AP006437.1-201ENST00000641440 3685 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 AC138915.1-201ENST00000565427 1685 ntBASIC2.18□□□□□ -2.06
SIX2Q9NPC8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SIX2Q9NPC8 RNU6-461P-201ENST00000364195 107 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RNU1-109P-201ENST00000383960 147 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.405-201ENST00000383979 100 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.451-201ENST00000384200 100 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.524-201ENST00000384564 100 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 Y_RNA.561-201ENST00000384694 100 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 MIR218-1-201ENST00000384999 110 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 MIR23A-201ENST00000385245 73 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RNU6-308P-201ENST00000390957 107 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RNU6-700P-201ENST00000391043 107 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC012306.1-201ENST00000423267 114 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC099799.1-201ENST00000439809 192 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AL035666.1-201ENST00000446195 348 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AL353752.1-201ENST00000454946 260 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 snoU13.6-201ENST00000458785 104 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 AC105758.1-201ENST00000506038 399 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RNU7-175P-201ENST00000515915 61 ntBASIC2.17□□□□□ -2.06
SIX2Q9NPC8 RNU6-567P-201ENST00000516746 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms