Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 SNRPGP20-201ENST00000604477 205 ntBASIC2.34□□□□□ -2.03
BRF2Q9HAW0 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
BRF2Q9HAW0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
BRF2Q9HAW0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
BRF2Q9HAW0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
BRF2Q9HAW0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
BRF2Q9HAW0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 SNORA18.2-201ENST00000383865 132 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.405-201ENST00000383979 100 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.451-201ENST00000384200 100 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 SNORD14D-201ENST00000384390 87 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.524-201ENST00000384564 100 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 RNU6-310P-201ENST00000384655 107 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.561-201ENST00000384694 100 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.646-201ENST00000410980 101 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.33□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.632-201ENST00000459189 102 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 RPS23P5-201ENST00000495419 428 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 ANXA2P1-201ENST00000505539 926 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 RNA5SP490-201ENST00000517141 136 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 ANP32BP3-201ENST00000559213 706 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC016727.2-201ENST00000603988 621 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC100812.1-201ENST00000607622 580 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC084781.2-201ENST00000615568 161 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC005562.2-201ENST00000618264 111 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 AC098657.3-201ENST00000620434 263 ntBASIC2.33□□□□□ -2.04
BRF2Q9HAW0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RNU4-73P-201ENST00000363164 141 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.319-201ENST00000365138 92 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RNU6-438P-201ENST00000365561 103 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 SNORA12.2-201ENST00000391040 156 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 SNORD23.1-201ENST00000408212 104 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 Z92545.1-201ENST00000411782 234 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 MTCO3P29-201ENST00000432119 779 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RPL30P10-201ENST00000488148 337 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RNU6-991P-201ENST00000516168 107 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 RNA5SP54-201ENST00000516951 92 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AC093027.1-201ENST00000546698 429 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AC005014.2-201ENST00000607795 599 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 AC012640.5-201ENST00000623897 319 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 MIR1291-201ENST00000627649 87 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 ZNF204P-201ENST00000416749 2397 ntBASIC2.32□□□□□ -2.04
BRF2Q9HAW0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
BRF2Q9HAW0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.58-201ENST00000362807 102 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 RNU1-76P-201ENST00000362903 159 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 SNORD115-3-201ENST00000363100 82 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 Y_RNA.154-201ENST00000363624 102 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 RNY3P1-201ENST00000365085 102 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 RNY3-201ENST00000365484 102 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MIR549A-201ENST00000385268 96 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 RNY4P36-201ENST00000391116 96 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC007098.1-201ENST00000420122 367 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC092423.1-201ENST00000430165 186 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AL035666.1-201ENST00000446195 348 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 RNU7-14P-201ENST00000459331 62 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC093259.1-201ENST00000509755 300 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC104581.2-201ENST00000572227 430 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MIR5006-201ENST00000583027 110 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MIR4795-201ENST00000584182 89 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC126177.8-201ENST00000618339 1015 ntBASIC2.31□□□□□ -2.04
BRF2Q9HAW0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
BRF2Q9HAW0 AC245060.5-201ENST00000610778 3293 ntBASIC2.3□□□□□ -2.04
BRF2Q9HAW0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
BRF2Q9HAW0 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
BRF2Q9HAW0 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
BRF2Q9HAW0 RNU6-890P-201ENST00000384121 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms