Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 snoU13.27-201ENST00000459278 104 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AL163973.1-201ENST00000484753 577 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AC091874.1-201ENST00000511402 339 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.86□□□□□ -2.27
ALX4Q9H161 AC106038.2-201ENST00000520706 568 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.86□□□□□ -2.27
ALX4Q9H161 MIR4703-201ENST00000577728 79 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 MIR3941-201ENST00000582572 103 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 CTHRC1P1-201ENST00000605383 469 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 MIR98-201ENST00000606724 119 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AL353149.1-201ENST00000610667 244 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AP001506.1-201ENST00000615444 211 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 OR4G1P-203ENST00000641984 1631 ntBASIC0.86□□□□□ -2.27
ALX4Q9H161 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
ALX4Q9H161 RNA5SP327-201ENST00000362494 101 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 RNU6-877P-201ENST00000383868 107 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 RNU6-1127P-201ENST00000384580 107 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 SNORA16.2-201ENST00000390991 127 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 HMGN1P14-201ENST00000412459 517 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AC012306.1-201ENST00000423267 114 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 SNX2P2-201ENST00000424553 323 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 RPL31P35-201ENST00000431058 377 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 USP9YP28-201ENST00000435142 589 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.85□□□□□ -2.27
ALX4Q9H161 AC022364.2-201ENST00000457963 554 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.85□□□□□ -2.27
ALX4Q9H161 AL133373.1-201ENST00000497098 94 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 RNA5SP220-201ENST00000516298 104 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AC069113.1-201ENST00000517763 267 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 MTCO3P23-201ENST00000561363 289 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 CYP3A52P-201ENST00000563326 91 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 SNORA59B-202ENST00000578183 701 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.85□□□□□ -2.27
ALX4Q9H161 AC011458.1-201ENST00000604034 617 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 Z84480.1-201ENST00000605131 311 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AC002044.1-201ENST00000606707 158 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AC008147.4-201ENST00000617570 1204 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 AL133216.2-202ENST00000634512 349 ntBASIC0.85□□□□□ -2.27
ALX4Q9H161 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.27
ALX4Q9H161 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 RNU6-266P-201ENST00000364225 107 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 SNORA29-201ENST00000384183 140 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 SNORA36A-201ENST00000384221 132 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 RNU6-331P-201ENST00000384724 107 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 MIR300-201ENST00000401138 83 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 COX6CP10-201ENST00000416832 224 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 SNRPEP10-201ENST00000420249 274 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.84□□□□□ -2.27
ALX4Q9H161 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.84□□□□□ -2.27
ALX4Q9H161 AL033528.1-201ENST00000453780 140 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC087343.1-201ENST00000477341 475 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AL163195.1-201ENST00000496941 348 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
ALX4Q9H161 AC011406.1-201ENST00000512440 370 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
ALX4Q9H161 RNU6-1129P-201ENST00000515964 104 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 RNU2-34P-201ENST00000516534 121 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 RNA5SP384-201ENST00000516615 116 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.84□□□□□ -2.27
ALX4Q9H161 AC245014.2-201ENST00000603689 287 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC246785.4-201ENST00000605374 287 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC126177.8-201ENST00000618339 1015 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 MIR8065-201ENST00000620577 100 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.84□□□□□ -2.27
ALX4Q9H161 SNORA43.4-201ENST00000629559 138 ntBASIC0.84□□□□□ -2.27
ALX4Q9H161 RNU6-562P-201ENST00000362731 107 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 Y_RNA.560-201ENST00000384689 102 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 SNORA40.3-201ENST00000390964 122 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AL031577.2-201ENST00000404133 280 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.83□□□□□ -2.28
ALX4Q9H161 AC060773.1-201ENST00000421698 310 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.83□□□□□ -2.28
ALX4Q9H161 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.83□□□□□ -2.28
ALX4Q9H161 AC073910.1-201ENST00000445047 438 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AC132479.1-201ENST00000449160 144 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.83□□□□□ -2.28
ALX4Q9H161 SCARNA18-201ENST00000459004 134 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.83□□□□□ -2.28
ALX4Q9H161 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AL512310.8-201ENST00000550183 120 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 AC008015.1-201ENST00000555505 465 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.83□□□□□ -2.28
ALX4Q9H161 AGGF1P4-201ENST00000568249 801 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 MIR6734-201ENST00000621166 68 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 BX322639.1-202ENST00000423987 2213 ntBASIC0.83□□□□□ -2.28
ALX4Q9H161 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ALX4Q9H161 MIR96-201ENST00000362288 78 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 RNU6-545P-201ENST00000362681 104 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 Y_RNA.399-201ENST00000383955 105 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 RNU6-418P-201ENST00000384035 107 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 RNU6-1093P-201ENST00000391194 107 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.82□□□□□ -2.28
ALX4Q9H161 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.82□□□□□ -2.28
ALX4Q9H161 AC091435.1-201ENST00000505442 584 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 RNA5SP404-201ENST00000517118 132 ntBASIC0.82□□□□□ -2.28
ALX4Q9H161 AC011604.1-201ENST00000545978 196 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms