Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 USP9YP30-201ENST00000430729 455 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 SNORD5.1-201ENST00000458800 75 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 snoU13.26-201ENST00000459452 105 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 AC025033.1-201ENST00000463883 194 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 AC145146.1-201ENST00000496370 254 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 AC026782.1-201ENST00000512952 449 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.48□□□□□ -2.01
USP44Q9H0E7 CBX3P7-201ENST00000532876 502 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 RAB11AP2-201ENST00000545905 639 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 PRELID2P1-201ENST00000552837 301 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.48□□□□□ -2.01
USP44Q9H0E7 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 AL359757.2-201ENST00000624309 274 ntBASIC2.48□□□□□ -2.01
USP44Q9H0E7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU1-52P-201ENST00000384190 164 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 Y_RNA.482-201ENST00000384377 111 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU6-601P-201ENST00000384540 107 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 MIR1289-2-201ENST00000408360 111 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU2-41P-201ENST00000410991 178 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU2-32P-201ENST00000411193 191 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 HMGN2P3-201ENST00000433603 273 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 HMGN2P5-201ENST00000436882 273 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC005741.1-201ENST00000511094 432 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 RNU6-1016P-201ENST00000516689 94 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 SNORA31.16-201ENST00000516773 139 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC034114.1-201ENST00000520293 285 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.47□□□□□ -2.01
USP44Q9H0E7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC026271.5-201ENST00000577873 130 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 7SK.7-201ENST00000603504 247 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 SNRPGP17-201ENST00000603780 214 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC018462.2-201ENST00000605375 395 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC099654.5-201ENST00000636479 350 ntBASIC2.47□□□□□ -2.01
USP44Q9H0E7 AC009487.4-201ENST00000624969 3585 ntBASIC2.46□□□□□ -2.01
USP44Q9H0E7 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 SNORD32B-201ENST00000364460 84 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 RNU6-842P-201ENST00000384269 107 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 Y_RNA.490-201ENST00000384413 102 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC022028.1-201ENST00000412054 408 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC245102.2-201ENST00000448956 180 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.46□□□□□ -2.02
USP44Q9H0E7 AL139109.1-201ENST00000455491 297 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.46□□□□□ -2.02
USP44Q9H0E7 Y_RNA.635-201ENST00000459041 101 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.46□□□□□ -2.02
USP44Q9H0E7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC104984.5-201ENST00000586878 94 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC011494.1-201ENST00000596454 237 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AL117336.2-201ENST00000602435 335 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AL078605.1-201ENST00000603529 500 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AC113139.1-201ENST00000605049 239 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 AP000654.2-201ENST00000605633 586 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 MIR1302-1-201ENST00000637932 143 ntBASIC2.46□□□□□ -2.02
USP44Q9H0E7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP44Q9H0E7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
USP44Q9H0E7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
USP44Q9H0E7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 SNORD50.1-201ENST00000362987 71 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 SNORA29-201ENST00000384183 140 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 RNU1-148P-201ENST00000384472 162 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 Y_RNA.594-201ENST00000410373 140 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 WARS2P1-201ENST00000429678 537 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 Y_RNA.670-201ENST00000516255 105 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 RNA5SP137-201ENST00000516833 135 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 AC093027.1-201ENST00000546698 429 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 AL355375.2-201ENST00000574825 175 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 AL359697.1-201ENST00000624879 587 ntBASIC2.45□□□□□ -2.02
USP44Q9H0E7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
USP44Q9H0E7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
USP44Q9H0E7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 RNU4-9P-201ENST00000364951 139 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 RNU6-26P-201ENST00000383985 107 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 SNORA36A-201ENST00000384221 132 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 U8.13-201ENST00000390842 128 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 RNU6-1050P-201ENST00000410388 107 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 RNU6-174P-201ENST00000410406 106 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 RNA5SP494-201ENST00000410653 129 ntBASIC2.44□□□□□ -2.02
USP44Q9H0E7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.44□□□□□ -2.02
USP44Q9H0E7 AC079354.2-201ENST00000453523 154 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms