Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MIR4273-201ENST00000582824 84 ntBASIC2.29□□□□□ -2.04
ZNF541Q9H0D2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZNF541Q9H0D2 RNU6-743P-201ENST00000364151 106 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 RNU6-965P-201ENST00000516721 96 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 RNA5SP490-201ENST00000517141 136 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 AP005639.2-201ENST00000527592 928 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 MIR4801-201ENST00000582704 82 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 U4atac.1-201ENST00000618345 95 ntBASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ZNF541Q9H0D2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
ZNF541Q9H0D2 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 RNU6-968P-201ENST00000384076 107 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 RNU6-306P-201ENST00000384617 107 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 MIR1294-201ENST00000408503 142 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 RNA5SP494-201ENST00000410653 129 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC068781.1-201ENST00000488231 618 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 MTCO2P30-201ENST00000503662 364 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC046134.1-201ENST00000514454 666 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 RNU7-30P-201ENST00000516835 62 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 MIR4742-201ENST00000581069 85 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC078795.3-201ENST00000602913 472 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 BX248123.2-201ENST00000606318 124 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AL133215.3-201ENST00000609801 448 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC009487.4-201ENST00000624969 3585 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC245060.5-201ENST00000610778 3293 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 AC233981.2-201ENST00000611524 1614 ntBASIC2.27□□□□□ -2.05
ZNF541Q9H0D2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 Y_RNA.301-201ENST00000364990 103 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 RNU1-52P-201ENST00000384190 164 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 MIR208B-201ENST00000401172 77 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AL591034.2-201ENST00000402839 359 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 RPL23AP95-201ENST00000426806 265 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC107399.1-201ENST00000451226 265 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 SNORA48.11-201ENST00000517015 89 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC118273.2-201ENST00000532092 465 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 CPDP1-201ENST00000579660 283 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 7SK.7-201ENST00000603504 247 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 AL161423.1-201ENST00000613700 262 ntBASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
ZNF541Q9H0D2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 RNU4-15P-201ENST00000362613 141 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 RNU1-23P-201ENST00000363361 144 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 SNORA25B-201ENST00000365507 128 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 SNORA36A-201ENST00000384221 132 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 MIR95-201ENST00000385072 81 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 RNU6-1093P-201ENST00000391194 107 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AC074085.1-201ENST00000413598 418 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 RPL21P111-201ENST00000418453 477 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AC012306.1-201ENST00000423267 114 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 MTND3P10-201ENST00000450967 341 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 PMCHL2-203ENST00000457791 237 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 RPS29P27-201ENST00000463711 170 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AC116353.2-201ENST00000505332 712 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 CYP4A27P-201ENST00000567218 190 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AP001094.1-201ENST00000579805 193 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 FGF7P1-201ENST00000582820 288 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 AC243960.4-201ENST00000600532 288 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 Z98751.3-201ENST00000604447 521 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 DUXAP9-208ENST00000622815 614 ntBASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZNF541Q9H0D2 KPNA2P1-201ENST00000458289 1591 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 RNU6-845P-201ENST00000362578 103 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 Y_RNA.135-201ENST00000363439 95 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 U3.9-201ENST00000363823 204 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 RNU6-944P-201ENST00000364023 107 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 Y_RNA.224-201ENST00000364308 111 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 RNU7-95P-201ENST00000459222 64 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 AC021146.2-201ENST00000504736 556 ntBASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.24□□□□□ -2.05
ZNF541Q9H0D2 CYCSP26-201ENST00000534107 320 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms