Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR3923-201ENST00000579521 83 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC146944.4-201ENST00000602697 718 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AL139022.2-201ENST00000606934 443 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC104465.1-201ENST00000611365 139 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC021506.2-201ENST00000612354 169 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 PCGEM1.1-201ENST00000613431 131 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 AC067863.3-201ENST00000624172 122 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 MIR338-201ENST00000636369 67 ntBASIC0.48□□□□□ -2.33
TRIM4Q9C037 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
TRIM4Q9C037 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 RNU1-76P-201ENST00000362903 159 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 Y_RNA.132-201ENST00000363421 102 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 SNORA33-201ENST00000363664 130 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 MTND1P12-201ENST00000455231 147 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 RNU6-1003P-201ENST00000517099 105 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.47□□□□□ -2.33
TRIM4Q9C037 TPRKBP2-201ENST00000565969 475 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 MIR5695-201ENST00000579717 85 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 AC010620.1-201ENST00000601088 1102 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 AC121334.2-201ENST00000605387 271 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 PART1_2.1-201ENST00000612397 250 ntBASIC0.47□□□□□ -2.33
TRIM4Q9C037 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
TRIM4Q9C037 AL391994.1-201ENST00000254724 282 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 SNORA72.2-201ENST00000365028 127 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 RNU4-12P-201ENST00000365233 139 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 RNU6-969P-201ENST00000383900 105 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 RNU6-692P-201ENST00000384496 107 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 MIR10B-201ENST00000385011 110 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AF228730.1-201ENST00000397972 663 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 RNU6-293P-201ENST00000411259 106 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRIM4Q9C037 AC245047.7-201ENST00000440265 293 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 C1DP4-201ENST00000455429 424 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
TRIM4Q9C037 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.46□□□□□ -2.34
TRIM4Q9C037 MTND3P25-201ENST00000509243 135 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.46□□□□□ -2.34
TRIM4Q9C037 SNORA19.3-201ENST00000516165 130 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 RNA5SP255-201ENST00000516370 107 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 MTATP6P15-201ENST00000527233 835 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.46□□□□□ -2.34
TRIM4Q9C037 EIF4A1P12-201ENST00000551910 141 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 MIR5589-201ENST00000579442 60 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 MIR5692A1-201ENST00000580523 69 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 MIR3118-1-201ENST00000581787 76 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AL606834.3-201ENST00000602615 496 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 AL929325.1-201ENST00000603096 117 ntBASIC0.46□□□□□ -2.34
TRIM4Q9C037 SNORD56.2-201ENST00000363242 71 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 RNU4-67P-201ENST00000364569 141 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 RNU6-378P-201ENST00000384324 107 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
TRIM4Q9C037 RNU2-3P-201ENST00000410144 191 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.45□□□□□ -2.34
TRIM4Q9C037 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 RNU6-922P-201ENST00000516753 99 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC073539.2-201ENST00000597113 165 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC023932.2-201ENST00000603176 175 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 AL157786.1-207ENST00000627771 695 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 AC106858.1-201ENST00000637497 429 ntBASIC0.45□□□□□ -2.34
TRIM4Q9C037 Y_RNA.110-201ENST00000363220 99 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 MIR329-2-201ENST00000385029 84 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.44□□□□□ -2.34
TRIM4Q9C037 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.44□□□□□ -2.34
TRIM4Q9C037 RPS23P5-201ENST00000495419 428 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 RBBP4P6-201ENST00000508098 202 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 AC022616.6-201ENST00000520479 119 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 AC078795.3-201ENST00000602913 472 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 MTND3P19-201ENST00000603825 345 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 AL353765.1-201ENST00000605514 183 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 AC009509.4-201ENST00000619202 509 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 BX322639.1-202ENST00000423987 2213 ntBASIC0.44□□□□□ -2.34
TRIM4Q9C037 SNORA24.1-201ENST00000384401 135 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 MIR329-1-201ENST00000385028 80 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 RNA5SP109-201ENST00000391010 116 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 MIR1912-201ENST00000410389 80 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC244023.1-201ENST00000426884 112 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 MTCYBP1-201ENST00000454315 1119 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC105758.1-201ENST00000506038 399 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 RNU6-276P-201ENST00000516114 96 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.43□□□□□ -2.34
TRIM4Q9C037 AC008521.1-201ENST00000587471 187 ntBASIC0.43□□□□□ -2.34
TRIM4Q9C037 AL031281.1-201ENST00000604049 488 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms