Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL356157.2-201ENST00000605122 111 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 AP001282.2-201ENST00000616149 309 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.15□□□□□ -1.91
SALL3Q9BXA9 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
SALL3Q9BXA9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.117-201ENST00000363294 101 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RNU6-799P-201ENST00000363567 107 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RNU6-105P-201ENST00000363909 104 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 SNORA25.6-201ENST00000364121 118 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RNY1-201ENST00000364228 113 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.477-201ENST00000384352 108 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RNU6-140P-201ENST00000384566 108 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 MIR1261-201ENST00000408659 82 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RPL21P38-201ENST00000418090 167 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AL121890.1-201ENST00000435457 205 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 snoU13.30-201ENST00000458951 104 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AC098869.1-201ENST00000481627 292 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 RNU6-182P-201ENST00000516970 105 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 CASP1P1-201ENST00000526345 212 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AC090617.3-201ENST00000573670 475 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AC010620.2-201ENST00000600135 313 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 AC009779.6-201ENST00000603972 165 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.772-201ENST00000606692 102 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 FTX_3.1-201ENST00000610451 147 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 U2.21-201ENST00000637295 81 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 U6.99-201ENST00000637524 83 ntBASIC3.14□□□□□ -1.91
SALL3Q9BXA9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SALL3Q9BXA9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AL391987.6-201ENST00000305671 199 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 snoU2_19.2-201ENST00000363024 80 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.352-201ENST00000365439 102 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 RNU6-217P-201ENST00000384164 104 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 MRPL35P1-201ENST00000404272 572 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AL606753.1-201ENST00000427435 87 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 MTCO3P29-201ENST00000432119 779 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 snoU109.2-201ENST00000459316 135 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 SRIP1-201ENST00000489235 288 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 SNORA43.2-201ENST00000516652 128 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AP004607.1-201ENST00000524456 203 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AC093023.1-201ENST00000547375 507 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 U6.92-201ENST00000636464 89 ntBASIC3.13□□□□□ -1.91
SALL3Q9BXA9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SALL3Q9BXA9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SALL3Q9BXA9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 SNORD115-32-201ENST00000364079 82 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 Z98749.2-208ENST00000381646 500 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNU6-17P-201ENST00000384245 107 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNU6-18P-201ENST00000384527 107 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 MIR518D-201ENST00000385014 87 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 GZMAP1-201ENST00000503054 631 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 HMGB1P35-201ENST00000503360 598 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 YWHAEP4-201ENST00000505390 198 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNU6-138P-201ENST00000515952 107 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNA5SP320-201ENST00000516263 124 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RNU6-1012P-201ENST00000516606 109 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 AC016256.1-201ENST00000547971 354 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 MIR4300-201ENST00000581016 96 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 RMST_6.1-201ENST00000611980 203 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 SCARNA4-201ENST00000629045 128 ntBASIC3.12□□□□□ -1.91
SALL3Q9BXA9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SALL3Q9BXA9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SALL3Q9BXA9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AC233981.2-201ENST00000611524 1614 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SALL3Q9BXA9 RNU6-942P-201ENST00000363002 107 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 RNU6-778P-201ENST00000363269 103 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 SNORD63-201ENST00000384262 68 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 Y_RNA.539-201ENST00000384635 107 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 RNA5SP508-201ENST00000411327 119 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 EIF1AXP1-201ENST00000419267 435 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AL358453.1-201ENST00000422522 250 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AC063976.3-201ENST00000426849 329 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AC098831.1-201ENST00000440661 216 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 RPS29P12-201ENST00000460178 152 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 CKS1BP7-201ENST00000522230 235 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 BX284668.6-201ENST00000606899 438 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 AC240442.1-201ENST00000616055 283 ntBASIC3.11□□□□□ -1.91
SALL3Q9BXA9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SALL3Q9BXA9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms