Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-1062P-201ENST00000383908 107 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 RNU6-21P-201ENST00000384710 107 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 SNORA53-201ENST00000391141 249 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 RPS26P42-201ENST00000413485 326 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AP001486.1-201ENST00000463339 476 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AL049873.1-201ENST00000480540 376 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 RPS27P26-201ENST00000494583 239 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.05□□□□□ -1.92
NDC1Q9BTX1 SNORA40.9-201ENST00000515895 93 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 RNA5SP54-201ENST00000516951 92 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AC004792.1-201ENST00000614523 137 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AL357075.2-201ENST00000614906 189 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 AC135776.4-201ENST00000624300 1904 ntBASIC3.05□□□□□ -1.92
NDC1Q9BTX1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.44-201ENST00000362676 108 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 RNU6-529P-201ENST00000363383 104 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 RNU6-326P-201ENST00000365480 107 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.570-201ENST00000384750 101 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 MIR549A-201ENST00000385268 96 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 U3.26-201ENST00000391236 204 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 MIR1298-201ENST00000408783 112 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 snoU13.14-201ENST00000459372 104 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC117440.1-201ENST00000474107 571 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 RNU5F-2P-201ENST00000516066 82 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 RNU2-31P-201ENST00000516954 155 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 CYP4A27P-201ENST00000567218 190 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AL137843.1-201ENST00000605078 385 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC010999.1-201ENST00000611856 324 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 FTX_2.1-201ENST00000618816 94 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 AC018692.3-201ENST00000623929 123 ntBASIC3.04□□□□□ -1.92
NDC1Q9BTX1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NDC1Q9BTX1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.76-201ENST00000362931 109 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.555-201ENST00000384673 110 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.569-201ENST00000384749 103 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 Y_RNA.595-201ENST00000410403 105 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AC112220.1-201ENST00000434628 355 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 RPL36AP48-201ENST00000485521 314 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 RNA5SP341-201ENST00000516261 117 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AC068657.1-201ENST00000520807 306 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 MIR3923-201ENST00000579521 83 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 MIR2682-201ENST00000580305 110 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 uc_338.25-201ENST00000613756 156 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 ZNF204P-201ENST00000416749 2397 ntBASIC3.03□□□□□ -1.92
NDC1Q9BTX1 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.03□□□□□ -1.92
NDC1Q9BTX1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 Y_RNA.83-201ENST00000363005 113 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 RNU5F-3P-201ENST00000363767 117 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 RNU6-1175P-201ENST00000365200 107 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 RNU1-101P-201ENST00000391171 127 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 ARF4P2-201ENST00000430209 526 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AL138752.1-201ENST00000452964 351 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC112771.1-201ENST00000463581 102 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC006445.1-201ENST00000491925 405 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 SNORA25.14-201ENST00000516481 132 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 MIR5047-201ENST00000579212 100 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 U6.98-201ENST00000637157 84 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.02□□□□□ -1.93
NDC1Q9BTX1 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
NDC1Q9BTX1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
NDC1Q9BTX1 AL109809.4-201ENST00000603520 2185 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms