Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Y_RNA.150-201ENST00000363562 102 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 RNU6-280P-201ENST00000364145 104 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 RNY1-201ENST00000364228 113 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.274-201ENST00000364714 101 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORD115-46-201ENST00000390982 71 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORD58.1-201ENST00000391313 66 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 HMGN2P8-201ENST00000391458 268 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL603910.2-201ENST00000407268 136 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORA3.2-201ENST00000408221 125 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AC097463.2-201ENST00000421074 142 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 MTCO3P29-201ENST00000432119 779 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AC244670.1-201ENST00000436879 112 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL031659.1-201ENST00000447075 539 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORD109B-201ENST00000458961 67 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORD109A-201ENST00000459128 67 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 SNORA31.6-201ENST00000516241 130 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 RNU6-567P-201ENST00000516746 107 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 RN7SKP209-201ENST00000516888 304 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 DEFB108E-201ENST00000524692 240 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL590705.4-201ENST00000532209 134 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL442163.3-201ENST00000554110 156 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AC021231.3-201ENST00000558497 370 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 MIR3136-201ENST00000583498 78 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AC004792.1-201ENST00000614523 137 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 MIR7157-201ENST00000635801 60 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL450472.1-202ENST00000637286 180 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 ZNF658B-202ENST00000615961 3375 ntBASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN3Q9BTN0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 RNU6-529P-201ENST00000363383 104 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.297-201ENST00000364950 91 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.352-201ENST00000365439 102 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 RNU6-968P-201ENST00000384076 107 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 SNORA18.3-201ENST00000384122 132 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 RNU1-57P-201ENST00000384491 166 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 MIR190B-201ENST00000401119 79 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AL133475.1-201ENST00000404414 305 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 Z98742.2-201ENST00000431564 187 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 snoU13.14-201ENST00000459372 104 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 SNRPGP7-201ENST00000469016 106 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC087190.1-201ENST00000484462 480 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC107032.1-201ENST00000485945 480 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC083906.5-201ENST00000503722 328 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 Y_RNA.713-201ENST00000517013 96 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC136932.1-201ENST00000574771 208 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 MIR4300-201ENST00000581016 96 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
LRFN3Q9BTN0 AC233981.2-201ENST00000611524 1614 ntBASIC3.15□□□□□ -1.9
LRFN3Q9BTN0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.15□□□□□ -1.9
LRFN3Q9BTN0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.15□□□□□ -1.9
LRFN3Q9BTN0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RNU1-70P-201ENST00000362618 164 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.65-201ENST00000362846 100 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1285P-201ENST00000363480 105 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.269-201ENST00000364685 89 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 U3.13-201ENST00000364804 214 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.358-201ENST00000365491 99 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1286P-201ENST00000383871 107 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 SNORA12.2-201ENST00000391040 156 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RPL21P75-201ENST00000396599 483 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RPL21P28-201ENST00000401418 483 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 MTCYBP2-201ENST00000407745 171 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 MIR1289-2-201ENST00000408360 111 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AL590556.1-201ENST00000423231 483 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 GPM6BP3-201ENST00000442797 145 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AL357552.1-201ENST00000445254 415 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AL392103.1-201ENST00000447000 198 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RN7SKP210-201ENST00000459176 261 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AC112771.1-201ENST00000463581 102 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RPL21P39-201ENST00000463605 483 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AC093591.1-201ENST00000491435 481 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 RPL21P16-201ENST00000495531 483 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AC091144.1-201ENST00000519573 138 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 AC027176.1-201ENST00000560204 514 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 MIR376A1-201ENST00000616574 68 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 U6.92-201ENST00000636464 89 ntBASIC3.15□□□□□ -1.91
LRFN3Q9BTN0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.54-201ENST00000362766 105 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms